Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
USP9XQ93008 ARTN-206ENST00000472435 402 ntTSL 3 BASIC15.72■□□□□ 0.11
USP9XQ93008 LAMTOR4-206ENST00000473459 720 ntTSL 2 BASIC15.72■□□□□ 0.11
USP9XQ93008 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
USP9XQ93008 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC15.72■□□□□ 0.11
USP9XQ93008 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
USP9XQ93008 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
USP9XQ93008 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC15.72■□□□□ 0.11
USP9XQ93008 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
USP9XQ93008 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC15.72■□□□□ 0.11
USP9XQ93008 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
USP9XQ93008 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
USP9XQ93008 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
USP9XQ93008 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
USP9XQ93008 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
USP9XQ93008 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.72■□□□□ 0.11
USP9XQ93008 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC15.72■□□□□ 0.11
USP9XQ93008 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.72■□□□□ 0.11
USP9XQ93008 AC023141.5-201ENST00000458585 616 ntBASIC15.72■□□□□ 0.11
USP9XQ93008 MAL2-202ENST00000531508 892 ntTSL 3 BASIC15.72■□□□□ 0.11
USP9XQ93008 AC051619.7-201ENST00000568314 623 ntBASIC15.72■□□□□ 0.11
USP9XQ93008 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC15.72■□□□□ 0.11
USP9XQ93008 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
USP9XQ93008 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC15.72■□□□□ 0.11
USP9XQ93008 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC15.71■□□□□ 0.11
USP9XQ93008 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC15.71■□□□□ 0.11
USP9XQ93008 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
USP9XQ93008 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC15.71■□□□□ 0.11
USP9XQ93008 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC15.71■□□□□ 0.11
USP9XQ93008 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
USP9XQ93008 AP002414.1-201ENST00000391405 1147 ntBASIC15.71■□□□□ 0.11
USP9XQ93008 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.71■□□□□ 0.11
USP9XQ93008 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC15.71■□□□□ 0.11
USP9XQ93008 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
USP9XQ93008 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
USP9XQ93008 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
USP9XQ93008 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
USP9XQ93008 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC15.71■□□□□ 0.11
USP9XQ93008 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
USP9XQ93008 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC15.71■□□□□ 0.11
USP9XQ93008 UROS-202ENST00000368778 1556 ntTSL 2 BASIC15.71■□□□□ 0.11
USP9XQ93008 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC15.71■□□□□ 0.11
USP9XQ93008 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC15.71■□□□□ 0.11
USP9XQ93008 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
USP9XQ93008 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
USP9XQ93008 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
USP9XQ93008 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
USP9XQ93008 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
USP9XQ93008 CD9-202ENST00000382515 1229 ntTSL 5 BASIC15.71■□□□□ 0.1
USP9XQ93008 AC004461.1-201ENST00000412461 403 ntBASIC15.71■□□□□ 0.1
USP9XQ93008 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.71■□□□□ 0.1
USP9XQ93008 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC15.71■□□□□ 0.1
USP9XQ93008 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.71■□□□□ 0.1
USP9XQ93008 AC025678.2-201ENST00000562061 970 ntBASIC15.71■□□□□ 0.1
USP9XQ93008 YTHDF3-AS1-201ENST00000603538 718 ntBASIC15.71■□□□□ 0.1
USP9XQ93008 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
USP9XQ93008 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
USP9XQ93008 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC15.7■□□□□ 0.1
USP9XQ93008 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
USP9XQ93008 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
USP9XQ93008 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
USP9XQ93008 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC15.7■□□□□ 0.1
USP9XQ93008 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC15.7■□□□□ 0.1
USP9XQ93008 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC15.7■□□□□ 0.1
USP9XQ93008 RNA5SP421-201ENST00000516864 134 ntBASIC15.7■□□□□ 0.1
USP9XQ93008 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.7■□□□□ 0.1
USP9XQ93008 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
USP9XQ93008 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
USP9XQ93008 AC010507.1-201ENST00000633895 436 ntBASIC15.7■□□□□ 0.1
USP9XQ93008 AC105339.1-204ENST00000636249 355 ntBASIC15.7■□□□□ 0.1
USP9XQ93008 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
USP9XQ93008 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
USP9XQ93008 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC15.7■□□□□ 0.1
USP9XQ93008 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
USP9XQ93008 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC15.7■□□□□ 0.1
USP9XQ93008 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
USP9XQ93008 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC15.7■□□□□ 0.1
USP9XQ93008 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
USP9XQ93008 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
USP9XQ93008 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.7■□□□□ 0.1
USP9XQ93008 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
USP9XQ93008 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.7■□□□□ 0.1
USP9XQ93008 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC15.7■□□□□ 0.1
USP9XQ93008 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
USP9XQ93008 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC15.7■□□□□ 0.1
USP9XQ93008 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
USP9XQ93008 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC15.7■□□□□ 0.1
USP9XQ93008 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC15.7■□□□□ 0.1
USP9XQ93008 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
USP9XQ93008 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC15.7■□□□□ 0.1
USP9XQ93008 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
USP9XQ93008 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC15.7■□□□□ 0.1
USP9XQ93008 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
USP9XQ93008 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
USP9XQ93008 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
USP9XQ93008 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC15.69■□□□□ 0.1
USP9XQ93008 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
USP9XQ93008 HLA-DRB6-201ENST00000411500 1235 ntBASIC15.69■□□□□ 0.1
USP9XQ93008 CRYGEP-201ENST00000412192 528 ntBASIC15.69■□□□□ 0.1
USP9XQ93008 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms