Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPB3Q92617 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPB3Q92617 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPB3Q92617 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
NPIPB3Q92617 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPB3Q92617 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPB3Q92617 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPB3Q92617 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC14.36□□□□□ -0.11
NPIPB3Q92617 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPB3Q92617 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPB3Q92617 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPB3Q92617 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPB3Q92617 CYP51A1P1-201ENST00000492267 1507 ntBASIC14.36□□□□□ -0.11
NPIPB3Q92617 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
NPIPB3Q92617 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPB3Q92617 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NPIPB3Q92617 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPB3Q92617 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPB3Q92617 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPB3Q92617 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPB3Q92617 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPB3Q92617 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPB3Q92617 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC14.35□□□□□ -0.11
NPIPB3Q92617 AC036111.1-201ENST00000533973 1582 ntBASIC14.35□□□□□ -0.11
NPIPB3Q92617 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPB3Q92617 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC14.35□□□□□ -0.11
NPIPB3Q92617 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPB3Q92617 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPB3Q92617 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPB3Q92617 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPB3Q92617 PEX7-202ENST00000367756 680 ntTSL 3 BASIC14.35□□□□□ -0.11
NPIPB3Q92617 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
NPIPB3Q92617 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC14.35□□□□□ -0.11
NPIPB3Q92617 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPB3Q92617 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC14.35□□□□□ -0.11
NPIPB3Q92617 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC14.35□□□□□ -0.11
NPIPB3Q92617 GRAP-204ENST00000573099 846 ntTSL 3 BASIC14.35□□□□□ -0.11
NPIPB3Q92617 MNT-208ENST00000575394 606 ntTSL 4 BASIC14.35□□□□□ -0.11
NPIPB3Q92617 ITM2C-210ENST00000620962 501 ntBASIC14.35□□□□□ -0.11
NPIPB3Q92617 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPB3Q92617 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPB3Q92617 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC14.35□□□□□ -0.11
NPIPB3Q92617 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
NPIPB3Q92617 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC14.35□□□□□ -0.11
NPIPB3Q92617 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC14.35□□□□□ -0.11
NPIPB3Q92617 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
NPIPB3Q92617 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB3Q92617 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB3Q92617 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NPIPB3Q92617 UROS-202ENST00000368778 1556 ntTSL 2 BASIC14.34□□□□□ -0.11
NPIPB3Q92617 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NPIPB3Q92617 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB3Q92617 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB3Q92617 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB3Q92617 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB3Q92617 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC14.34□□□□□ -0.11
NPIPB3Q92617 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
NPIPB3Q92617 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB3Q92617 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
NPIPB3Q92617 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
NPIPB3Q92617 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB3Q92617 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB3Q92617 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB3Q92617 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB3Q92617 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB3Q92617 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB3Q92617 MIR149-201ENST00000384879 89 ntBASIC14.34□□□□□ -0.11
NPIPB3Q92617 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC14.34□□□□□ -0.11
NPIPB3Q92617 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC14.34□□□□□ -0.11
NPIPB3Q92617 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB3Q92617 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC14.34□□□□□ -0.11
NPIPB3Q92617 AC142381.4-202ENST00000563973 229 ntBASIC14.34□□□□□ -0.11
NPIPB3Q92617 MIR4674-201ENST00000582457 87 ntBASIC14.34□□□□□ -0.11
NPIPB3Q92617 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
NPIPB3Q92617 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC14.34□□□□□ -0.11
NPIPB3Q92617 GRAMD4P8-201ENST00000605465 1115 ntBASIC14.34□□□□□ -0.11
NPIPB3Q92617 AP001412.1-201ENST00000608405 714 ntBASIC14.34□□□□□ -0.11
NPIPB3Q92617 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB3Q92617 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB3Q92617 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC14.34□□□□□ -0.11
NPIPB3Q92617 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB3Q92617 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB3Q92617 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB3Q92617 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
NPIPB3Q92617 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB3Q92617 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB3Q92617 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB3Q92617 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB3Q92617 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB3Q92617 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
NPIPB3Q92617 AC012317.2-201ENST00000623305 2251 ntBASIC14.34□□□□□ -0.11
NPIPB3Q92617 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC14.34□□□□□ -0.11
NPIPB3Q92617 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
NPIPB3Q92617 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
NPIPB3Q92617 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
NPIPB3Q92617 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
NPIPB3Q92617 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.33□□□□□ -0.11
NPIPB3Q92617 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
NPIPB3Q92617 HLA-DQB1-201ENST00000374943 1656 ntBASIC14.33□□□□□ -0.11
NPIPB3Q92617 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms