Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC23.71■■□□□ 1.39
RAPGEF4Q8WZA2 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
RAPGEF4Q8WZA2 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
RAPGEF4Q8WZA2 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC23.71■■□□□ 1.39
RAPGEF4Q8WZA2 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC23.71■■□□□ 1.39
RAPGEF4Q8WZA2 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC23.71■■□□□ 1.39
RAPGEF4Q8WZA2 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC23.71■■□□□ 1.39
RAPGEF4Q8WZA2 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC23.71■■□□□ 1.39
RAPGEF4Q8WZA2 AL356488.2-201ENST00000602755 427 ntBASIC23.71■■□□□ 1.39
RAPGEF4Q8WZA2 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC23.71■■□□□ 1.39
RAPGEF4Q8WZA2 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RAPGEF4Q8WZA2 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC23.71■■□□□ 1.39
RAPGEF4Q8WZA2 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
RAPGEF4Q8WZA2 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RAPGEF4Q8WZA2 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
RAPGEF4Q8WZA2 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
RAPGEF4Q8WZA2 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC23.7■■□□□ 1.39
RAPGEF4Q8WZA2 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.39
RAPGEF4Q8WZA2 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RAPGEF4Q8WZA2 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
RAPGEF4Q8WZA2 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RAPGEF4Q8WZA2 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RAPGEF4Q8WZA2 AC073130.3-201ENST00000624389 2278 ntBASIC23.7■■□□□ 1.38
RAPGEF4Q8WZA2 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RAPGEF4Q8WZA2 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RAPGEF4Q8WZA2 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC23.7■■□□□ 1.38
RAPGEF4Q8WZA2 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RAPGEF4Q8WZA2 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RAPGEF4Q8WZA2 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC23.7■■□□□ 1.38
RAPGEF4Q8WZA2 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC23.7■■□□□ 1.38
RAPGEF4Q8WZA2 AC092183.1-201ENST00000469884 875 ntBASIC23.7■■□□□ 1.38
RAPGEF4Q8WZA2 RNA5SP415-201ENST00000517246 115 ntBASIC23.7■■□□□ 1.38
RAPGEF4Q8WZA2 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC23.7■■□□□ 1.38
RAPGEF4Q8WZA2 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC23.7■■□□□ 1.38
RAPGEF4Q8WZA2 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC23.7■■□□□ 1.38
RAPGEF4Q8WZA2 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
RAPGEF4Q8WZA2 Z83851.2-201ENST00000609564 659 ntBASIC23.7■■□□□ 1.38
RAPGEF4Q8WZA2 AP000867.4-201ENST00000641616 219 ntBASIC23.7■■□□□ 1.38
RAPGEF4Q8WZA2 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC23.7■■□□□ 1.38
RAPGEF4Q8WZA2 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RAPGEF4Q8WZA2 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC23.7■■□□□ 1.38
RAPGEF4Q8WZA2 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC23.7■■□□□ 1.38
RAPGEF4Q8WZA2 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
RAPGEF4Q8WZA2 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC23.69■■□□□ 1.38
RAPGEF4Q8WZA2 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RAPGEF4Q8WZA2 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC23.69■■□□□ 1.38
RAPGEF4Q8WZA2 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC23.69■■□□□ 1.38
RAPGEF4Q8WZA2 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC23.69■■□□□ 1.38
RAPGEF4Q8WZA2 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
RAPGEF4Q8WZA2 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC23.69■■□□□ 1.38
RAPGEF4Q8WZA2 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
RAPGEF4Q8WZA2 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
RAPGEF4Q8WZA2 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RAPGEF4Q8WZA2 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC23.69■■□□□ 1.38
RAPGEF4Q8WZA2 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
RAPGEF4Q8WZA2 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RAPGEF4Q8WZA2 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RAPGEF4Q8WZA2 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RAPGEF4Q8WZA2 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC23.69■■□□□ 1.38
RAPGEF4Q8WZA2 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC23.69■■□□□ 1.38
RAPGEF4Q8WZA2 AL591424.1-201ENST00000442569 1213 ntBASIC23.69■■□□□ 1.38
RAPGEF4Q8WZA2 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC23.69■■□□□ 1.38
RAPGEF4Q8WZA2 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
RAPGEF4Q8WZA2 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC23.69■■□□□ 1.38
RAPGEF4Q8WZA2 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
RAPGEF4Q8WZA2 AC107918.4-202ENST00000641623 219 ntBASIC23.69■■□□□ 1.38
RAPGEF4Q8WZA2 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
RAPGEF4Q8WZA2 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
RAPGEF4Q8WZA2 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC23.69■■□□□ 1.38
RAPGEF4Q8WZA2 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
RAPGEF4Q8WZA2 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC23.69■■□□□ 1.38
RAPGEF4Q8WZA2 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC23.68■■□□□ 1.38
RAPGEF4Q8WZA2 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RAPGEF4Q8WZA2 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC23.68■■□□□ 1.38
RAPGEF4Q8WZA2 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RAPGEF4Q8WZA2 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RAPGEF4Q8WZA2 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RAPGEF4Q8WZA2 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC23.68■■□□□ 1.38
RAPGEF4Q8WZA2 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RAPGEF4Q8WZA2 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC23.68■■□□□ 1.38
RAPGEF4Q8WZA2 ANO7L1-203ENST00000602586 1720 ntBASIC23.68■■□□□ 1.38
RAPGEF4Q8WZA2 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RAPGEF4Q8WZA2 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC23.68■■□□□ 1.38
RAPGEF4Q8WZA2 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RAPGEF4Q8WZA2 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC23.68■■□□□ 1.38
RAPGEF4Q8WZA2 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RAPGEF4Q8WZA2 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
RAPGEF4Q8WZA2 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC23.68■■□□□ 1.38
RAPGEF4Q8WZA2 AC007967.3-201ENST00000434308 558 ntBASIC23.68■■□□□ 1.38
RAPGEF4Q8WZA2 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
RAPGEF4Q8WZA2 AC105339.3-201ENST00000560043 636 ntBASIC23.68■■□□□ 1.38
RAPGEF4Q8WZA2 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC23.68■■□□□ 1.38
RAPGEF4Q8WZA2 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC23.68■■□□□ 1.38
RAPGEF4Q8WZA2 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
RAPGEF4Q8WZA2 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
RAPGEF4Q8WZA2 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
RAPGEF4Q8WZA2 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC23.68■■□□□ 1.38
RAPGEF4Q8WZA2 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
RAPGEF4Q8WZA2 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
RAPGEF4Q8WZA2 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC23.68■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 46.7 ms