Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAB40AQ8WXH6 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAB40AQ8WXH6 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RAB40AQ8WXH6 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
RAB40AQ8WXH6 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC15.99■□□□□ 0.15
RAB40AQ8WXH6 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC15.99■□□□□ 0.15
RAB40AQ8WXH6 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAB40AQ8WXH6 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAB40AQ8WXH6 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
RAB40AQ8WXH6 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAB40AQ8WXH6 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAB40AQ8WXH6 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAB40AQ8WXH6 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAB40AQ8WXH6 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC15.98■□□□□ 0.15
RAB40AQ8WXH6 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAB40AQ8WXH6 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAB40AQ8WXH6 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAB40AQ8WXH6 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAB40AQ8WXH6 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAB40AQ8WXH6 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
RAB40AQ8WXH6 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAB40AQ8WXH6 AC004951.3-201ENST00000418645 1148 ntBASIC15.98■□□□□ 0.15
RAB40AQ8WXH6 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC15.98■□□□□ 0.15
RAB40AQ8WXH6 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAB40AQ8WXH6 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC15.98■□□□□ 0.15
RAB40AQ8WXH6 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC15.98■□□□□ 0.15
RAB40AQ8WXH6 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC15.98■□□□□ 0.15
RAB40AQ8WXH6 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC15.98■□□□□ 0.15
RAB40AQ8WXH6 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC15.98■□□□□ 0.15
RAB40AQ8WXH6 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAB40AQ8WXH6 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC15.98■□□□□ 0.15
RAB40AQ8WXH6 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC15.98■□□□□ 0.15
RAB40AQ8WXH6 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAB40AQ8WXH6 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
RAB40AQ8WXH6 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAB40AQ8WXH6 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
RAB40AQ8WXH6 AL357033.4-201ENST00000617703 1807 ntBASIC15.98■□□□□ 0.15
RAB40AQ8WXH6 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC15.98■□□□□ 0.15
RAB40AQ8WXH6 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
RAB40AQ8WXH6 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
RAB40AQ8WXH6 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC15.98■□□□□ 0.15
RAB40AQ8WXH6 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC15.97■□□□□ 0.15
RAB40AQ8WXH6 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC15.97■□□□□ 0.15
RAB40AQ8WXH6 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAB40AQ8WXH6 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
RAB40AQ8WXH6 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC15.97■□□□□ 0.15
RAB40AQ8WXH6 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAB40AQ8WXH6 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC15.97■□□□□ 0.15
RAB40AQ8WXH6 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB40AQ8WXH6 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB40AQ8WXH6 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAB40AQ8WXH6 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB40AQ8WXH6 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC15.97■□□□□ 0.15
RAB40AQ8WXH6 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC15.97■□□□□ 0.15
RAB40AQ8WXH6 MNT-208ENST00000575394 606 ntTSL 4 BASIC15.97■□□□□ 0.15
RAB40AQ8WXH6 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAB40AQ8WXH6 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC15.97■□□□□ 0.15
RAB40AQ8WXH6 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB40AQ8WXH6 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAB40AQ8WXH6 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAB40AQ8WXH6 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB40AQ8WXH6 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB40AQ8WXH6 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAB40AQ8WXH6 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
RAB40AQ8WXH6 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.97■□□□□ 0.15
RAB40AQ8WXH6 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAB40AQ8WXH6 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC15.97■□□□□ 0.15
RAB40AQ8WXH6 AC099398.1-201ENST00000567919 2776 ntBASIC15.97■□□□□ 0.15
RAB40AQ8WXH6 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB40AQ8WXH6 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB40AQ8WXH6 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
RAB40AQ8WXH6 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC15.97■□□□□ 0.15
RAB40AQ8WXH6 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB40AQ8WXH6 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
RAB40AQ8WXH6 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC15.97■□□□□ 0.15
RAB40AQ8WXH6 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
RAB40AQ8WXH6 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC15.96■□□□□ 0.15
RAB40AQ8WXH6 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
RAB40AQ8WXH6 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RAB40AQ8WXH6 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB40AQ8WXH6 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB40AQ8WXH6 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
RAB40AQ8WXH6 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.96■□□□□ 0.15
RAB40AQ8WXH6 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB40AQ8WXH6 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB40AQ8WXH6 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC15.96■□□□□ 0.15
RAB40AQ8WXH6 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB40AQ8WXH6 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC15.96■□□□□ 0.15
RAB40AQ8WXH6 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB40AQ8WXH6 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB40AQ8WXH6 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
RAB40AQ8WXH6 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
RAB40AQ8WXH6 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
RAB40AQ8WXH6 AL390955.1-201ENST00000428694 934 ntBASIC15.96■□□□□ 0.15
RAB40AQ8WXH6 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC15.96■□□□□ 0.15
RAB40AQ8WXH6 AC097488.1-201ENST00000507834 756 ntBASIC15.96■□□□□ 0.15
RAB40AQ8WXH6 NAPSB-206ENST00000562112 1266 ntBASIC15.96■□□□□ 0.15
RAB40AQ8WXH6 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC15.96■□□□□ 0.15
RAB40AQ8WXH6 AP000692.2-201ENST00000608391 879 ntBASIC15.96■□□□□ 0.15
RAB40AQ8WXH6 AC012306.2-201ENST00000609350 630 ntBASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms