Protein–RNA interactions for Protein: Q8WVD3

RNF138, E3 ubiquitin-protein ligase RNF138, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF138Q8WVD3 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.38■□□□□ 0.21
RNF138Q8WVD3 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RNF138Q8WVD3 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RNF138Q8WVD3 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.37■□□□□ 0.21
RNF138Q8WVD3 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RNF138Q8WVD3 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC16.37■□□□□ 0.21
RNF138Q8WVD3 AC125634.1-201ENST00000438758 1403 ntBASIC16.37■□□□□ 0.21
RNF138Q8WVD3 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF138Q8WVD3 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF138Q8WVD3 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
RNF138Q8WVD3 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF138Q8WVD3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
RNF138Q8WVD3 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF138Q8WVD3 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF138Q8WVD3 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
RNF138Q8WVD3 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.37■□□□□ 0.21
RNF138Q8WVD3 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RNF138Q8WVD3 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC16.37■□□□□ 0.21
RNF138Q8WVD3 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF138Q8WVD3 AC011840.4-201ENST00000578471 627 ntBASIC16.37■□□□□ 0.21
RNF138Q8WVD3 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.37■□□□□ 0.21
RNF138Q8WVD3 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.37■□□□□ 0.21
RNF138Q8WVD3 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RNF138Q8WVD3 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
RNF138Q8WVD3 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
RNF138Q8WVD3 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF138Q8WVD3 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF138Q8WVD3 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF138Q8WVD3 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
RNF138Q8WVD3 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF138Q8WVD3 NOC2LP1-202ENST00000452600 2235 ntBASIC16.37■□□□□ 0.21
RNF138Q8WVD3 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
RNF138Q8WVD3 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF138Q8WVD3 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF138Q8WVD3 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.36■□□□□ 0.21
RNF138Q8WVD3 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RNF138Q8WVD3 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RNF138Q8WVD3 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
RNF138Q8WVD3 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.36■□□□□ 0.21
RNF138Q8WVD3 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RNF138Q8WVD3 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RNF138Q8WVD3 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF138Q8WVD3 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF138Q8WVD3 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.36■□□□□ 0.21
RNF138Q8WVD3 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
RNF138Q8WVD3 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF138Q8WVD3 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
RNF138Q8WVD3 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
RNF138Q8WVD3 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC16.36■□□□□ 0.21
RNF138Q8WVD3 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.36■□□□□ 0.21
RNF138Q8WVD3 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC16.36■□□□□ 0.21
RNF138Q8WVD3 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC16.36■□□□□ 0.21
RNF138Q8WVD3 AC012615.1-201ENST00000565797 1299 ntBASIC16.36■□□□□ 0.21
RNF138Q8WVD3 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC16.36■□□□□ 0.21
RNF138Q8WVD3 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF138Q8WVD3 Z69720.1-201ENST00000601483 472 ntBASIC16.36■□□□□ 0.21
RNF138Q8WVD3 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF138Q8WVD3 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RNF138Q8WVD3 AC100803.2-201ENST00000562459 1963 ntBASIC16.36■□□□□ 0.21
RNF138Q8WVD3 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RNF138Q8WVD3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF138Q8WVD3 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF138Q8WVD3 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC16.36■□□□□ 0.21
RNF138Q8WVD3 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RNF138Q8WVD3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF138Q8WVD3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
RNF138Q8WVD3 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
RNF138Q8WVD3 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF138Q8WVD3 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.36■□□□□ 0.21
RNF138Q8WVD3 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
RNF138Q8WVD3 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
RNF138Q8WVD3 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.36■□□□□ 0.21
RNF138Q8WVD3 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF138Q8WVD3 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
RNF138Q8WVD3 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF138Q8WVD3 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF138Q8WVD3 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF138Q8WVD3 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.35■□□□□ 0.21
RNF138Q8WVD3 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
RNF138Q8WVD3 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC16.35■□□□□ 0.21
RNF138Q8WVD3 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF138Q8WVD3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
RNF138Q8WVD3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
RNF138Q8WVD3 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF138Q8WVD3 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF138Q8WVD3 LINC00265-3P-201ENST00000447588 903 ntBASIC16.35■□□□□ 0.21
RNF138Q8WVD3 KRT17P6-201ENST00000453795 1220 ntBASIC16.35■□□□□ 0.21
RNF138Q8WVD3 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.35■□□□□ 0.21
RNF138Q8WVD3 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC16.35■□□□□ 0.21
RNF138Q8WVD3 VENTXP7-201ENST00000475503 772 ntBASIC16.35■□□□□ 0.21
RNF138Q8WVD3 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC16.35■□□□□ 0.21
RNF138Q8WVD3 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.35■□□□□ 0.21
RNF138Q8WVD3 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.35■□□□□ 0.21
RNF138Q8WVD3 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC16.35■□□□□ 0.21
RNF138Q8WVD3 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
RNF138Q8WVD3 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.35■□□□□ 0.21
RNF138Q8WVD3 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF138Q8WVD3 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF138Q8WVD3 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
RNF138Q8WVD3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms