Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRAF3IP1Q8TDR0 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAF3IP1Q8TDR0 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAF3IP1Q8TDR0 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRAF3IP1Q8TDR0 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAF3IP1Q8TDR0 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.95■□□□□ 0.62
TRAF3IP1Q8TDR0 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.95■□□□□ 0.62
TRAF3IP1Q8TDR0 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRAF3IP1Q8TDR0 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC18.95■□□□□ 0.62
TRAF3IP1Q8TDR0 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC18.95■□□□□ 0.62
TRAF3IP1Q8TDR0 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC18.95■□□□□ 0.62
TRAF3IP1Q8TDR0 AC024243.1-201ENST00000609234 778 ntBASIC18.95■□□□□ 0.62
TRAF3IP1Q8TDR0 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAF3IP1Q8TDR0 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
TRAF3IP1Q8TDR0 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
TRAF3IP1Q8TDR0 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.95■□□□□ 0.62
TRAF3IP1Q8TDR0 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
TRAF3IP1Q8TDR0 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAF3IP1Q8TDR0 KRT18P22-201ENST00000402024 1347 ntBASIC18.95■□□□□ 0.62
TRAF3IP1Q8TDR0 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAF3IP1Q8TDR0 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
TRAF3IP1Q8TDR0 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
TRAF3IP1Q8TDR0 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.95■□□□□ 0.62
TRAF3IP1Q8TDR0 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAF3IP1Q8TDR0 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAF3IP1Q8TDR0 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAF3IP1Q8TDR0 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.94■□□□□ 0.62
TRAF3IP1Q8TDR0 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAF3IP1Q8TDR0 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAF3IP1Q8TDR0 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAF3IP1Q8TDR0 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
TRAF3IP1Q8TDR0 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC18.94■□□□□ 0.62
TRAF3IP1Q8TDR0 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
TRAF3IP1Q8TDR0 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAF3IP1Q8TDR0 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAF3IP1Q8TDR0 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAF3IP1Q8TDR0 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC18.94■□□□□ 0.62
TRAF3IP1Q8TDR0 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAF3IP1Q8TDR0 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAF3IP1Q8TDR0 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC18.94■□□□□ 0.62
TRAF3IP1Q8TDR0 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.94■□□□□ 0.62
TRAF3IP1Q8TDR0 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAF3IP1Q8TDR0 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.94■□□□□ 0.62
TRAF3IP1Q8TDR0 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.94■□□□□ 0.62
TRAF3IP1Q8TDR0 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.94■□□□□ 0.62
TRAF3IP1Q8TDR0 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC18.94■□□□□ 0.62
TRAF3IP1Q8TDR0 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC18.94■□□□□ 0.62
TRAF3IP1Q8TDR0 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC18.94■□□□□ 0.62
TRAF3IP1Q8TDR0 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAF3IP1Q8TDR0 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAF3IP1Q8TDR0 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAF3IP1Q8TDR0 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC18.94■□□□□ 0.62
TRAF3IP1Q8TDR0 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
TRAF3IP1Q8TDR0 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
TRAF3IP1Q8TDR0 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TRAF3IP1Q8TDR0 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
TRAF3IP1Q8TDR0 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
TRAF3IP1Q8TDR0 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
TRAF3IP1Q8TDR0 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
TRAF3IP1Q8TDR0 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
TRAF3IP1Q8TDR0 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAF3IP1Q8TDR0 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAF3IP1Q8TDR0 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.93■□□□□ 0.62
TRAF3IP1Q8TDR0 OR6D1P-203ENST00000641209 4860 ntBASIC18.93■□□□□ 0.62
TRAF3IP1Q8TDR0 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAF3IP1Q8TDR0 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAF3IP1Q8TDR0 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.93■□□□□ 0.62
TRAF3IP1Q8TDR0 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.93■□□□□ 0.62
TRAF3IP1Q8TDR0 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAF3IP1Q8TDR0 AP000523.1-201ENST00000398242 1049 ntBASIC18.93■□□□□ 0.62
TRAF3IP1Q8TDR0 TMA16-209ENST00000513272 803 ntTSL 2 BASIC18.93■□□□□ 0.62
TRAF3IP1Q8TDR0 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.93■□□□□ 0.62
TRAF3IP1Q8TDR0 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAF3IP1Q8TDR0 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC18.93■□□□□ 0.62
TRAF3IP1Q8TDR0 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAF3IP1Q8TDR0 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAF3IP1Q8TDR0 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.93■□□□□ 0.62
TRAF3IP1Q8TDR0 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAF3IP1Q8TDR0 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TRAF3IP1Q8TDR0 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAF3IP1Q8TDR0 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAF3IP1Q8TDR0 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAF3IP1Q8TDR0 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TRAF3IP1Q8TDR0 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TRAF3IP1Q8TDR0 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TRAF3IP1Q8TDR0 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAF3IP1Q8TDR0 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC18.92■□□□□ 0.62
TRAF3IP1Q8TDR0 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TRAF3IP1Q8TDR0 AC068880.1-201ENST00000507289 2297 ntBASIC18.92■□□□□ 0.62
TRAF3IP1Q8TDR0 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.92■□□□□ 0.62
TRAF3IP1Q8TDR0 FLJ13224-201ENST00000313737 1514 ntBASIC18.92■□□□□ 0.62
TRAF3IP1Q8TDR0 Telomerase-vert.1-201ENST00000363312 438 ntBASIC18.92■□□□□ 0.62
TRAF3IP1Q8TDR0 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAF3IP1Q8TDR0 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TRAF3IP1Q8TDR0 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TRAF3IP1Q8TDR0 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.92■□□□□ 0.62
TRAF3IP1Q8TDR0 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC18.92■□□□□ 0.62
TRAF3IP1Q8TDR0 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.92■□□□□ 0.62
TRAF3IP1Q8TDR0 NEK4P2-201ENST00000580004 1012 ntBASIC18.92■□□□□ 0.62
TRAF3IP1Q8TDR0 NT5C-210ENST00000582160 860 ntTSL 2 BASIC18.92■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms