Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
SRFBP1Q8NEF9 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.33■□□□□ 0.36
SRFBP1Q8NEF9 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SRFBP1Q8NEF9 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
SRFBP1Q8NEF9 SPDYE15P-201ENST00000424157 909 ntBASIC17.33■□□□□ 0.36
SRFBP1Q8NEF9 HLA-F-220ENST00000434407 884 ntBASIC17.33■□□□□ 0.36
SRFBP1Q8NEF9 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
SRFBP1Q8NEF9 DUX4L26-201ENST00000489078 1255 ntBASIC17.33■□□□□ 0.36
SRFBP1Q8NEF9 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.33■□□□□ 0.36
SRFBP1Q8NEF9 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.33■□□□□ 0.36
SRFBP1Q8NEF9 FGF14-AS2-201ENST00000606448 1074 ntBASIC17.33■□□□□ 0.36
SRFBP1Q8NEF9 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
SRFBP1Q8NEF9 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
SRFBP1Q8NEF9 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.33■□□□□ 0.36
SRFBP1Q8NEF9 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC17.33■□□□□ 0.36
SRFBP1Q8NEF9 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
SRFBP1Q8NEF9 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
SRFBP1Q8NEF9 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRFBP1Q8NEF9 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRFBP1Q8NEF9 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC17.32■□□□□ 0.36
SRFBP1Q8NEF9 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRFBP1Q8NEF9 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRFBP1Q8NEF9 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRFBP1Q8NEF9 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC17.32■□□□□ 0.36
SRFBP1Q8NEF9 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SRFBP1Q8NEF9 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
SRFBP1Q8NEF9 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.32■□□□□ 0.36
SRFBP1Q8NEF9 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.32■□□□□ 0.36
SRFBP1Q8NEF9 KRT18P48-201ENST00000434763 852 ntBASIC17.32■□□□□ 0.36
SRFBP1Q8NEF9 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC17.32■□□□□ 0.36
SRFBP1Q8NEF9 AC022616.7-201ENST00000525383 220 ntBASIC17.32■□□□□ 0.36
SRFBP1Q8NEF9 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.32■□□□□ 0.36
SRFBP1Q8NEF9 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRFBP1Q8NEF9 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
SRFBP1Q8NEF9 LTB4R2-202ENST00000528054 3092 ntBASIC17.32■□□□□ 0.36
SRFBP1Q8NEF9 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.32■□□□□ 0.36
SRFBP1Q8NEF9 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRFBP1Q8NEF9 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRFBP1Q8NEF9 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRFBP1Q8NEF9 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.32■□□□□ 0.36
SRFBP1Q8NEF9 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.32■□□□□ 0.36
SRFBP1Q8NEF9 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
SRFBP1Q8NEF9 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.32■□□□□ 0.36
SRFBP1Q8NEF9 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRFBP1Q8NEF9 AC093010.1-201ENST00000473625 1624 ntBASIC17.32■□□□□ 0.36
SRFBP1Q8NEF9 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
SRFBP1Q8NEF9 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRFBP1Q8NEF9 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
SRFBP1Q8NEF9 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
SRFBP1Q8NEF9 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRFBP1Q8NEF9 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRFBP1Q8NEF9 AL096828.2-201ENST00000567259 1965 ntBASIC17.31■□□□□ 0.36
SRFBP1Q8NEF9 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRFBP1Q8NEF9 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SRFBP1Q8NEF9 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.31■□□□□ 0.36
SRFBP1Q8NEF9 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRFBP1Q8NEF9 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.31■□□□□ 0.36
SRFBP1Q8NEF9 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.31■□□□□ 0.36
SRFBP1Q8NEF9 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRFBP1Q8NEF9 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRFBP1Q8NEF9 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRFBP1Q8NEF9 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.31■□□□□ 0.36
SRFBP1Q8NEF9 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRFBP1Q8NEF9 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRFBP1Q8NEF9 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRFBP1Q8NEF9 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC17.31■□□□□ 0.36
SRFBP1Q8NEF9 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SRFBP1Q8NEF9 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SRFBP1Q8NEF9 FAM210CP-201ENST00000445714 574 ntBASIC17.31■□□□□ 0.36
SRFBP1Q8NEF9 AC112907.2-201ENST00000448639 330 ntBASIC17.31■□□□□ 0.36
SRFBP1Q8NEF9 AL359075.1-203ENST00000462729 1002 ntBASIC17.31■□□□□ 0.36
SRFBP1Q8NEF9 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SRFBP1Q8NEF9 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SRFBP1Q8NEF9 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.31■□□□□ 0.36
SRFBP1Q8NEF9 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC17.31■□□□□ 0.36
SRFBP1Q8NEF9 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SRFBP1Q8NEF9 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.31■□□□□ 0.36
SRFBP1Q8NEF9 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.31■□□□□ 0.36
SRFBP1Q8NEF9 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
SRFBP1Q8NEF9 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
SRFBP1Q8NEF9 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRFBP1Q8NEF9 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.31■□□□□ 0.36
SRFBP1Q8NEF9 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRFBP1Q8NEF9 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SRFBP1Q8NEF9 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SRFBP1Q8NEF9 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SRFBP1Q8NEF9 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SRFBP1Q8NEF9 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRFBP1Q8NEF9 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRFBP1Q8NEF9 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
SRFBP1Q8NEF9 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
SRFBP1Q8NEF9 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
SRFBP1Q8NEF9 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRFBP1Q8NEF9 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
SRFBP1Q8NEF9 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRFBP1Q8NEF9 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SRFBP1Q8NEF9 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SRFBP1Q8NEF9 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC17.3■□□□□ 0.36
SRFBP1Q8NEF9 KRT18P21-201ENST00000515767 1272 ntBASIC17.3■□□□□ 0.36
SRFBP1Q8NEF9 LY6E-213ENST00000522528 606 ntTSL 3 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms