Protein–RNA interactions for Protein: Q8NCS4

TMEM35B, Transmembrane protein 35B, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM35BQ8NCS4 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM35BQ8NCS4 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
TMEM35BQ8NCS4 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM35BQ8NCS4 NOC2LP2-201ENST00000407594 1944 ntBASIC19.23■□□□□ 0.67
TMEM35BQ8NCS4 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.23■□□□□ 0.67
TMEM35BQ8NCS4 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM35BQ8NCS4 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.23■□□□□ 0.67
TMEM35BQ8NCS4 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM35BQ8NCS4 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM35BQ8NCS4 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.23■□□□□ 0.67
TMEM35BQ8NCS4 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM35BQ8NCS4 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM35BQ8NCS4 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM35BQ8NCS4 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM35BQ8NCS4 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.23■□□□□ 0.67
TMEM35BQ8NCS4 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
TMEM35BQ8NCS4 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
TMEM35BQ8NCS4 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TMEM35BQ8NCS4 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM35BQ8NCS4 RCN1P1-201ENST00000400413 996 ntBASIC19.23■□□□□ 0.67
TMEM35BQ8NCS4 FAM8A6P-201ENST00000407496 1135 ntBASIC19.23■□□□□ 0.67
TMEM35BQ8NCS4 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM35BQ8NCS4 AC104076.2-201ENST00000448912 469 ntBASIC19.23■□□□□ 0.67
TMEM35BQ8NCS4 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.23■□□□□ 0.67
TMEM35BQ8NCS4 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC19.23■□□□□ 0.67
TMEM35BQ8NCS4 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC19.23■□□□□ 0.67
TMEM35BQ8NCS4 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC19.23■□□□□ 0.67
TMEM35BQ8NCS4 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM35BQ8NCS4 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC19.23■□□□□ 0.67
TMEM35BQ8NCS4 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC19.23■□□□□ 0.67
TMEM35BQ8NCS4 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC19.23■□□□□ 0.67
TMEM35BQ8NCS4 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
TMEM35BQ8NCS4 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM35BQ8NCS4 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM35BQ8NCS4 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC19.23■□□□□ 0.67
TMEM35BQ8NCS4 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM35BQ8NCS4 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.23■□□□□ 0.67
TMEM35BQ8NCS4 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM35BQ8NCS4 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
TMEM35BQ8NCS4 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
TMEM35BQ8NCS4 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.23■□□□□ 0.67
TMEM35BQ8NCS4 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM35BQ8NCS4 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM35BQ8NCS4 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.23■□□□□ 0.67
TMEM35BQ8NCS4 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM35BQ8NCS4 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM35BQ8NCS4 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
TMEM35BQ8NCS4 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM35BQ8NCS4 KRT89P-201ENST00000620027 1478 ntBASIC19.22■□□□□ 0.67
TMEM35BQ8NCS4 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.22■□□□□ 0.67
TMEM35BQ8NCS4 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM35BQ8NCS4 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.22■□□□□ 0.67
TMEM35BQ8NCS4 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM35BQ8NCS4 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM35BQ8NCS4 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.22■□□□□ 0.67
TMEM35BQ8NCS4 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM35BQ8NCS4 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC19.22■□□□□ 0.67
TMEM35BQ8NCS4 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM35BQ8NCS4 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM35BQ8NCS4 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.22■□□□□ 0.67
TMEM35BQ8NCS4 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.22■□□□□ 0.67
TMEM35BQ8NCS4 HLA-F-220ENST00000434407 884 ntBASIC19.22■□□□□ 0.67
TMEM35BQ8NCS4 SLC25A6P5-201ENST00000435663 894 ntBASIC19.22■□□□□ 0.67
TMEM35BQ8NCS4 AC092647.4-201ENST00000457211 535 ntBASIC19.22■□□□□ 0.67
TMEM35BQ8NCS4 AC113404.2-201ENST00000507884 177 ntBASIC19.22■□□□□ 0.67
TMEM35BQ8NCS4 RN7SL850P-201ENST00000579959 291 ntBASIC19.22■□□□□ 0.67
TMEM35BQ8NCS4 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC19.22■□□□□ 0.67
TMEM35BQ8NCS4 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
TMEM35BQ8NCS4 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
TMEM35BQ8NCS4 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.22■□□□□ 0.67
TMEM35BQ8NCS4 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM35BQ8NCS4 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM35BQ8NCS4 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TMEM35BQ8NCS4 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM35BQ8NCS4 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM35BQ8NCS4 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM35BQ8NCS4 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM35BQ8NCS4 AP000997.3-201ENST00000623333 2250 ntBASIC19.22■□□□□ 0.67
TMEM35BQ8NCS4 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM35BQ8NCS4 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM35BQ8NCS4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.22■□□□□ 0.67
TMEM35BQ8NCS4 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM35BQ8NCS4 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM35BQ8NCS4 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM35BQ8NCS4 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM35BQ8NCS4 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
TMEM35BQ8NCS4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.22■□□□□ 0.67
TMEM35BQ8NCS4 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.21■□□□□ 0.67
TMEM35BQ8NCS4 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM35BQ8NCS4 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM35BQ8NCS4 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.21■□□□□ 0.67
TMEM35BQ8NCS4 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM35BQ8NCS4 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM35BQ8NCS4 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM35BQ8NCS4 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM35BQ8NCS4 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM35BQ8NCS4 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM35BQ8NCS4 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM35BQ8NCS4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TMEM35BQ8NCS4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms