Protein–RNA interactions for Protein: Q8NCQ3

LINC00301, Putative uncharacterized protein encoded by LINC00301, humanhuman

Predictions only

Length 95 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00301Q8NCQ3 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
LINC00301Q8NCQ3 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00301Q8NCQ3 AC100803.2-201ENST00000562459 1963 ntBASIC20.65■□□□□ 0.9
LINC00301Q8NCQ3 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00301Q8NCQ3 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00301Q8NCQ3 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00301Q8NCQ3 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
LINC00301Q8NCQ3 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC20.65■□□□□ 0.9
LINC00301Q8NCQ3 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00301Q8NCQ3 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.65■□□□□ 0.9
LINC00301Q8NCQ3 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00301Q8NCQ3 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00301Q8NCQ3 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00301Q8NCQ3 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00301Q8NCQ3 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00301Q8NCQ3 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
LINC00301Q8NCQ3 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00301Q8NCQ3 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
LINC00301Q8NCQ3 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
LINC00301Q8NCQ3 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
LINC00301Q8NCQ3 AC020916.1-201ENST00000587762 1774 ntBASIC20.64■□□□□ 0.9
LINC00301Q8NCQ3 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC20.64■□□□□ 0.9
LINC00301Q8NCQ3 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
LINC00301Q8NCQ3 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
LINC00301Q8NCQ3 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LINC00301Q8NCQ3 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LINC00301Q8NCQ3 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
LINC00301Q8NCQ3 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
LINC00301Q8NCQ3 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
LINC00301Q8NCQ3 PP12613-201ENST00000424958 2230 ntBASIC20.64■□□□□ 0.89
LINC00301Q8NCQ3 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LINC00301Q8NCQ3 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
LINC00301Q8NCQ3 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.64■□□□□ 0.89
LINC00301Q8NCQ3 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LINC00301Q8NCQ3 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
LINC00301Q8NCQ3 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.64■□□□□ 0.89
LINC00301Q8NCQ3 AL596275.1-201ENST00000423464 877 ntBASIC20.64■□□□□ 0.89
LINC00301Q8NCQ3 ECEL1P3-201ENST00000427961 737 ntBASIC20.64■□□□□ 0.89
LINC00301Q8NCQ3 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC20.64■□□□□ 0.89
LINC00301Q8NCQ3 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.64■□□□□ 0.89
LINC00301Q8NCQ3 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.64■□□□□ 0.89
LINC00301Q8NCQ3 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.64■□□□□ 0.89
LINC00301Q8NCQ3 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC20.64■□□□□ 0.89
LINC00301Q8NCQ3 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.64■□□□□ 0.89
LINC00301Q8NCQ3 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LINC00301Q8NCQ3 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
LINC00301Q8NCQ3 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.64■□□□□ 0.89
LINC00301Q8NCQ3 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.64■□□□□ 0.89
LINC00301Q8NCQ3 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LINC00301Q8NCQ3 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC20.64■□□□□ 0.89
LINC00301Q8NCQ3 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
LINC00301Q8NCQ3 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LINC00301Q8NCQ3 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LINC00301Q8NCQ3 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20.63■□□□□ 0.89
LINC00301Q8NCQ3 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC20.63■□□□□ 0.89
LINC00301Q8NCQ3 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
LINC00301Q8NCQ3 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LINC00301Q8NCQ3 LINC00167-201ENST00000530583 1419 ntBASIC20.63■□□□□ 0.89
LINC00301Q8NCQ3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.63■□□□□ 0.89
LINC00301Q8NCQ3 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
LINC00301Q8NCQ3 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LINC00301Q8NCQ3 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LINC00301Q8NCQ3 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LINC00301Q8NCQ3 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC20.63■□□□□ 0.89
LINC00301Q8NCQ3 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.63■□□□□ 0.89
LINC00301Q8NCQ3 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LINC00301Q8NCQ3 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC20.63■□□□□ 0.89
LINC00301Q8NCQ3 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC20.63■□□□□ 0.89
LINC00301Q8NCQ3 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.63■□□□□ 0.89
LINC00301Q8NCQ3 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.63■□□□□ 0.89
LINC00301Q8NCQ3 AC092865.7-201ENST00000641832 219 ntBASIC20.63■□□□□ 0.89
LINC00301Q8NCQ3 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC20.63■□□□□ 0.89
LINC00301Q8NCQ3 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LINC00301Q8NCQ3 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC20.63■□□□□ 0.89
LINC00301Q8NCQ3 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LINC00301Q8NCQ3 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
LINC00301Q8NCQ3 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
LINC00301Q8NCQ3 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LINC00301Q8NCQ3 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
LINC00301Q8NCQ3 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
LINC00301Q8NCQ3 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
LINC00301Q8NCQ3 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
LINC00301Q8NCQ3 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
LINC00301Q8NCQ3 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LINC00301Q8NCQ3 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LINC00301Q8NCQ3 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LINC00301Q8NCQ3 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.62■□□□□ 0.89
LINC00301Q8NCQ3 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC20.62■□□□□ 0.89
LINC00301Q8NCQ3 AL645608.8-201ENST00000606034 2086 ntBASIC20.62■□□□□ 0.89
LINC00301Q8NCQ3 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
LINC00301Q8NCQ3 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
LINC00301Q8NCQ3 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC20.62■□□□□ 0.89
LINC00301Q8NCQ3 PVRIG2P-201ENST00000435460 978 ntBASIC20.62■□□□□ 0.89
LINC00301Q8NCQ3 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC20.62■□□□□ 0.89
LINC00301Q8NCQ3 AL157888.1-201ENST00000631930 593 ntBASIC20.62■□□□□ 0.89
LINC00301Q8NCQ3 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
LINC00301Q8NCQ3 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LINC00301Q8NCQ3 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC20.62■□□□□ 0.89
LINC00301Q8NCQ3 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
LINC00301Q8NCQ3 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms