Protein–RNA interactions for Protein: Q8N684

CPSF7, Cleavage and polyadenylation specificity factor subunit 7, humanhuman

Known RBP Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7Q8N684 NAPSB-206ENST00000562112 1266 ntBASIC17.77■□□□□ 0.44
CPSF7Q8N684 AC027682.4-201ENST00000605277 798 ntTSL 5 BASIC17.77■□□□□ 0.44
CPSF7Q8N684 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CPSF7Q8N684 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
CPSF7Q8N684 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.77■□□□□ 0.43
CPSF7Q8N684 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.77■□□□□ 0.43
CPSF7Q8N684 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.77■□□□□ 0.43
CPSF7Q8N684 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
CPSF7Q8N684 LINC01568-207ENST00000641790 1380 ntBASIC17.77■□□□□ 0.43
CPSF7Q8N684 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.77■□□□□ 0.43
CPSF7Q8N684 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.77■□□□□ 0.43
CPSF7Q8N684 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
CPSF7Q8N684 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPSF7Q8N684 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
CPSF7Q8N684 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPSF7Q8N684 PP12613-201ENST00000424958 2230 ntBASIC17.76■□□□□ 0.43
CPSF7Q8N684 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPSF7Q8N684 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CPSF7Q8N684 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPSF7Q8N684 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPSF7Q8N684 AC012313.1-201ENST00000593393 3059 ntBASIC17.76■□□□□ 0.43
CPSF7Q8N684 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPSF7Q8N684 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CPSF7Q8N684 AC080080.1-201ENST00000625121 2420 ntBASIC17.76■□□□□ 0.43
CPSF7Q8N684 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPSF7Q8N684 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CPSF7Q8N684 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPSF7Q8N684 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPSF7Q8N684 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
CPSF7Q8N684 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CPSF7Q8N684 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.76■□□□□ 0.43
CPSF7Q8N684 AC011506.1-201ENST00000474329 610 ntBASIC17.76■□□□□ 0.43
CPSF7Q8N684 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPSF7Q8N684 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
CPSF7Q8N684 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CPSF7Q8N684 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC17.76■□□□□ 0.43
CPSF7Q8N684 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CPSF7Q8N684 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.76■□□□□ 0.43
CPSF7Q8N684 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC17.76■□□□□ 0.43
CPSF7Q8N684 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
CPSF7Q8N684 AC099398.1-201ENST00000567919 2776 ntBASIC17.76■□□□□ 0.43
CPSF7Q8N684 RARA-206ENST00000425707 3041 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CPSF7Q8N684 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
CPSF7Q8N684 HARS-201ENST00000307633 1780 ntTSL 2 BASIC17.76■□□□□ 0.43
CPSF7Q8N684 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
CPSF7Q8N684 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC17.76■□□□□ 0.43
CPSF7Q8N684 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
CPSF7Q8N684 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.75■□□□□ 0.43
CPSF7Q8N684 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CPSF7Q8N684 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
CPSF7Q8N684 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPSF7Q8N684 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.75■□□□□ 0.43
CPSF7Q8N684 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPSF7Q8N684 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.75■□□□□ 0.43
CPSF7Q8N684 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPSF7Q8N684 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC17.75■□□□□ 0.43
CPSF7Q8N684 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPSF7Q8N684 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
CPSF7Q8N684 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPSF7Q8N684 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
CPSF7Q8N684 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
CPSF7Q8N684 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPSF7Q8N684 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.75■□□□□ 0.43
CPSF7Q8N684 RN7SL850P-201ENST00000579959 291 ntBASIC17.75■□□□□ 0.43
CPSF7Q8N684 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.75■□□□□ 0.43
CPSF7Q8N684 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.75■□□□□ 0.43
CPSF7Q8N684 AC010947.1-201ENST00000623454 693 ntBASIC17.75■□□□□ 0.43
CPSF7Q8N684 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPSF7Q8N684 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
CPSF7Q8N684 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
CPSF7Q8N684 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPSF7Q8N684 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPSF7Q8N684 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPSF7Q8N684 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPSF7Q8N684 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC17.75■□□□□ 0.43
CPSF7Q8N684 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC17.75■□□□□ 0.43
CPSF7Q8N684 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.75■□□□□ 0.43
CPSF7Q8N684 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
CPSF7Q8N684 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPSF7Q8N684 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.75■□□□□ 0.43
CPSF7Q8N684 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPSF7Q8N684 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPSF7Q8N684 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
CPSF7Q8N684 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPSF7Q8N684 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CPSF7Q8N684 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPSF7Q8N684 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CPSF7Q8N684 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC17.74■□□□□ 0.43
CPSF7Q8N684 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CPSF7Q8N684 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPSF7Q8N684 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
CPSF7Q8N684 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.74■□□□□ 0.43
CPSF7Q8N684 NME9-203ENST00000383180 2133 ntTSL 2 BASIC17.74■□□□□ 0.43
CPSF7Q8N684 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CPSF7Q8N684 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPSF7Q8N684 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.74■□□□□ 0.43
CPSF7Q8N684 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
CPSF7Q8N684 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
CPSF7Q8N684 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
CPSF7Q8N684 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms