Protein–RNA interactions for Protein: Q8N1N4

KRT78, Keratin, type II cytoskeletal 78, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78Q8N1N4 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.54■□□□□ 0.4
KRT78Q8N1N4 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
KRT78Q8N1N4 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
KRT78Q8N1N4 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
KRT78Q8N1N4 AL024508.2-201ENST00000607749 1894 ntBASIC17.54■□□□□ 0.4
KRT78Q8N1N4 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.54■□□□□ 0.4
KRT78Q8N1N4 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.54■□□□□ 0.4
KRT78Q8N1N4 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT78Q8N1N4 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT78Q8N1N4 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT78Q8N1N4 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT78Q8N1N4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.54■□□□□ 0.4
KRT78Q8N1N4 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
KRT78Q8N1N4 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT78Q8N1N4 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT78Q8N1N4 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
KRT78Q8N1N4 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KRT78Q8N1N4 AC117947.1-201ENST00000427448 529 ntBASIC17.54■□□□□ 0.4
KRT78Q8N1N4 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.54■□□□□ 0.4
KRT78Q8N1N4 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC17.54■□□□□ 0.4
KRT78Q8N1N4 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT78Q8N1N4 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KRT78Q8N1N4 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.54■□□□□ 0.4
KRT78Q8N1N4 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.54■□□□□ 0.4
KRT78Q8N1N4 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT78Q8N1N4 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KRT78Q8N1N4 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.54■□□□□ 0.4
KRT78Q8N1N4 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT78Q8N1N4 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KRT78Q8N1N4 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT78Q8N1N4 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT78Q8N1N4 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
KRT78Q8N1N4 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT78Q8N1N4 RNF217-211ENST00000560949 5145 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
KRT78Q8N1N4 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
KRT78Q8N1N4 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC17.54■□□□□ 0.4
KRT78Q8N1N4 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT78Q8N1N4 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.53■□□□□ 0.4
KRT78Q8N1N4 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT78Q8N1N4 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT78Q8N1N4 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KRT78Q8N1N4 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
KRT78Q8N1N4 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT78Q8N1N4 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT78Q8N1N4 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT78Q8N1N4 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
KRT78Q8N1N4 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT78Q8N1N4 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KRT78Q8N1N4 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.53■□□□□ 0.4
KRT78Q8N1N4 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
KRT78Q8N1N4 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC17.53■□□□□ 0.4
KRT78Q8N1N4 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.53■□□□□ 0.4
KRT78Q8N1N4 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT78Q8N1N4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.53■□□□□ 0.4
KRT78Q8N1N4 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
KRT78Q8N1N4 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT78Q8N1N4 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT78Q8N1N4 RNF152P1-201ENST00000397754 604 ntBASIC17.53■□□□□ 0.4
KRT78Q8N1N4 STARP1-201ENST00000397973 869 ntBASIC17.53■□□□□ 0.4
KRT78Q8N1N4 HOMER2P1-201ENST00000455653 964 ntBASIC17.53■□□□□ 0.4
KRT78Q8N1N4 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT78Q8N1N4 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.53■□□□□ 0.4
KRT78Q8N1N4 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.53■□□□□ 0.4
KRT78Q8N1N4 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.53■□□□□ 0.4
KRT78Q8N1N4 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT78Q8N1N4 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC17.53■□□□□ 0.4
KRT78Q8N1N4 LINC01126-201ENST00000623515 1646 ntBASIC17.53■□□□□ 0.4
KRT78Q8N1N4 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT78Q8N1N4 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT78Q8N1N4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.53■□□□□ 0.4
KRT78Q8N1N4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
KRT78Q8N1N4 AL096828.2-201ENST00000567259 1965 ntBASIC17.53■□□□□ 0.4
KRT78Q8N1N4 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
KRT78Q8N1N4 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT78Q8N1N4 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
KRT78Q8N1N4 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
KRT78Q8N1N4 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT78Q8N1N4 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
KRT78Q8N1N4 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
KRT78Q8N1N4 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
KRT78Q8N1N4 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.52■□□□□ 0.4
KRT78Q8N1N4 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT78Q8N1N4 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC17.52■□□□□ 0.4
KRT78Q8N1N4 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT78Q8N1N4 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT78Q8N1N4 RABEP1-202ENST00000537505 5365 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT78Q8N1N4 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT78Q8N1N4 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT78Q8N1N4 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
KRT78Q8N1N4 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT78Q8N1N4 AK4P3-201ENST00000418260 669 ntBASIC17.52■□□□□ 0.4
KRT78Q8N1N4 TSPY5P-201ENST00000426936 936 ntBASIC17.52■□□□□ 0.4
KRT78Q8N1N4 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
KRT78Q8N1N4 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT78Q8N1N4 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
KRT78Q8N1N4 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.52■□□□□ 0.4
KRT78Q8N1N4 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.52■□□□□ 0.4
KRT78Q8N1N4 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC17.52■□□□□ 0.4
KRT78Q8N1N4 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
KRT78Q8N1N4 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 60.6 ms