Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SIX5Q8N196 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.54■□□□□ 0.56
SIX5Q8N196 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SIX5Q8N196 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SIX5Q8N196 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SIX5Q8N196 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SIX5Q8N196 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SIX5Q8N196 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
SIX5Q8N196 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SIX5Q8N196 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SIX5Q8N196 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.54■□□□□ 0.56
SIX5Q8N196 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.54■□□□□ 0.56
SIX5Q8N196 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SIX5Q8N196 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SIX5Q8N196 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SIX5Q8N196 CENPM-204ENST00000402420 688 ntTSL 5 BASIC18.54■□□□□ 0.56
SIX5Q8N196 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SIX5Q8N196 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.54■□□□□ 0.56
SIX5Q8N196 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.54■□□□□ 0.56
SIX5Q8N196 UNC93B6-202ENST00000528242 690 ntBASIC18.54■□□□□ 0.56
SIX5Q8N196 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SIX5Q8N196 AC105339.3-201ENST00000560043 636 ntBASIC18.54■□□□□ 0.56
SIX5Q8N196 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.54■□□□□ 0.56
SIX5Q8N196 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.54■□□□□ 0.56
SIX5Q8N196 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.54■□□□□ 0.56
SIX5Q8N196 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC18.54■□□□□ 0.56
SIX5Q8N196 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
SIX5Q8N196 AL138831.2-201ENST00000606564 490 ntBASIC18.54■□□□□ 0.56
SIX5Q8N196 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SIX5Q8N196 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SIX5Q8N196 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SIX5Q8N196 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SIX5Q8N196 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
SIX5Q8N196 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SIX5Q8N196 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SIX5Q8N196 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SIX5Q8N196 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC18.53■□□□□ 0.56
SIX5Q8N196 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
SIX5Q8N196 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC18.53■□□□□ 0.56
SIX5Q8N196 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SIX5Q8N196 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SIX5Q8N196 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SIX5Q8N196 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SIX5Q8N196 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
SIX5Q8N196 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SIX5Q8N196 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SIX5Q8N196 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC18.53■□□□□ 0.56
SIX5Q8N196 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SIX5Q8N196 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
SIX5Q8N196 AC023274.1-201ENST00000418278 595 ntBASIC18.53■□□□□ 0.56
SIX5Q8N196 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.53■□□□□ 0.56
SIX5Q8N196 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SIX5Q8N196 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.53■□□□□ 0.56
SIX5Q8N196 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC18.53■□□□□ 0.56
SIX5Q8N196 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC18.53■□□□□ 0.56
SIX5Q8N196 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SIX5Q8N196 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SIX5Q8N196 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SIX5Q8N196 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
SIX5Q8N196 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SIX5Q8N196 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
SIX5Q8N196 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SIX5Q8N196 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SIX5Q8N196 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SIX5Q8N196 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SIX5Q8N196 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SIX5Q8N196 KRT18P28-201ENST00000453838 1332 ntBASIC18.52■□□□□ 0.56
SIX5Q8N196 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
SIX5Q8N196 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.52■□□□□ 0.56
SIX5Q8N196 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.52■□□□□ 0.56
SIX5Q8N196 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.52■□□□□ 0.56
SIX5Q8N196 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SIX5Q8N196 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
SIX5Q8N196 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC18.52■□□□□ 0.56
SIX5Q8N196 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SIX5Q8N196 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.52■□□□□ 0.56
SIX5Q8N196 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SIX5Q8N196 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SIX5Q8N196 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.52■□□□□ 0.56
SIX5Q8N196 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
SIX5Q8N196 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SIX5Q8N196 AC211486.1-202ENST00000416371 468 ntBASIC18.52■□□□□ 0.56
SIX5Q8N196 AC211476.1-201ENST00000503899 468 ntBASIC18.52■□□□□ 0.56
SIX5Q8N196 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.52■□□□□ 0.56
SIX5Q8N196 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.52■□□□□ 0.56
SIX5Q8N196 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
SIX5Q8N196 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC18.52■□□□□ 0.56
SIX5Q8N196 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC18.52■□□□□ 0.56
SIX5Q8N196 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC18.52■□□□□ 0.56
SIX5Q8N196 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
SIX5Q8N196 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.52■□□□□ 0.56
SIX5Q8N196 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SIX5Q8N196 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.55
SIX5Q8N196 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
SIX5Q8N196 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.55
SIX5Q8N196 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
SIX5Q8N196 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.55
SIX5Q8N196 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.52■□□□□ 0.55
SIX5Q8N196 AP002414.3-201ENST00000589352 1468 ntBASIC18.52■□□□□ 0.55
SIX5Q8N196 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms