Protein–RNA interactions for Protein: Q8IYI8

ZNF440, Zinc finger protein 440, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440Q8IYI8 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.62■□□□□ 0.25
ZNF440Q8IYI8 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF440Q8IYI8 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
ZNF440Q8IYI8 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF440Q8IYI8 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
ZNF440Q8IYI8 HHATL-201ENST00000310417 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF440Q8IYI8 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF440Q8IYI8 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF440Q8IYI8 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF440Q8IYI8 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF440Q8IYI8 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC16.61■□□□□ 0.25
ZNF440Q8IYI8 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.61■□□□□ 0.25
ZNF440Q8IYI8 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC16.61■□□□□ 0.25
ZNF440Q8IYI8 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
ZNF440Q8IYI8 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF440Q8IYI8 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF440Q8IYI8 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
ZNF440Q8IYI8 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF440Q8IYI8 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF440Q8IYI8 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF440Q8IYI8 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.61■□□□□ 0.25
ZNF440Q8IYI8 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.61■□□□□ 0.25
ZNF440Q8IYI8 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF440Q8IYI8 AC113404.2-201ENST00000507884 177 ntBASIC16.61■□□□□ 0.25
ZNF440Q8IYI8 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
ZNF440Q8IYI8 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC16.61■□□□□ 0.25
ZNF440Q8IYI8 AC010203.1-204ENST00000548782 407 ntBASIC16.61■□□□□ 0.25
ZNF440Q8IYI8 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF440Q8IYI8 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
ZNF440Q8IYI8 AL023973.1-201ENST00000624619 620 ntBASIC16.61■□□□□ 0.25
ZNF440Q8IYI8 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF440Q8IYI8 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF440Q8IYI8 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF440Q8IYI8 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF440Q8IYI8 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF440Q8IYI8 AC022898.2-201ENST00000616822 1312 ntBASIC16.61■□□□□ 0.25
ZNF440Q8IYI8 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF440Q8IYI8 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF440Q8IYI8 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
ZNF440Q8IYI8 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.61■□□□□ 0.25
ZNF440Q8IYI8 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
ZNF440Q8IYI8 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF440Q8IYI8 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF440Q8IYI8 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
ZNF440Q8IYI8 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF440Q8IYI8 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
ZNF440Q8IYI8 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.61■□□□□ 0.25
ZNF440Q8IYI8 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF440Q8IYI8 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF440Q8IYI8 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
ZNF440Q8IYI8 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
ZNF440Q8IYI8 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
ZNF440Q8IYI8 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF440Q8IYI8 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.6■□□□□ 0.25
ZNF440Q8IYI8 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF440Q8IYI8 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF440Q8IYI8 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF440Q8IYI8 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC16.6■□□□□ 0.25
ZNF440Q8IYI8 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF440Q8IYI8 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF440Q8IYI8 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF440Q8IYI8 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF440Q8IYI8 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF440Q8IYI8 RASA4DP-201ENST00000460726 1199 ntBASIC16.6■□□□□ 0.25
ZNF440Q8IYI8 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.6■□□□□ 0.25
ZNF440Q8IYI8 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF440Q8IYI8 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF440Q8IYI8 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF440Q8IYI8 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF440Q8IYI8 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF440Q8IYI8 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
ZNF440Q8IYI8 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.6■□□□□ 0.25
ZNF440Q8IYI8 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF440Q8IYI8 KRT89P-201ENST00000620027 1478 ntBASIC16.6■□□□□ 0.25
ZNF440Q8IYI8 KRT18P55-202ENST00000578578 1546 ntBASIC16.6■□□□□ 0.25
ZNF440Q8IYI8 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
ZNF440Q8IYI8 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF440Q8IYI8 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF440Q8IYI8 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF440Q8IYI8 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
ZNF440Q8IYI8 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.59■□□□□ 0.25
ZNF440Q8IYI8 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC16.59■□□□□ 0.25
ZNF440Q8IYI8 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC16.59■□□□□ 0.25
ZNF440Q8IYI8 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.59■□□□□ 0.25
ZNF440Q8IYI8 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.59■□□□□ 0.25
ZNF440Q8IYI8 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF440Q8IYI8 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF440Q8IYI8 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF440Q8IYI8 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF440Q8IYI8 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF440Q8IYI8 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
ZNF440Q8IYI8 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC16.59■□□□□ 0.25
ZNF440Q8IYI8 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC16.59■□□□□ 0.25
ZNF440Q8IYI8 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC16.59■□□□□ 0.25
ZNF440Q8IYI8 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
ZNF440Q8IYI8 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
ZNF440Q8IYI8 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.59■□□□□ 0.25
ZNF440Q8IYI8 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
ZNF440Q8IYI8 LINC00574-201ENST00000420557 2318 ntTSL 2 BASIC16.59■□□□□ 0.25
ZNF440Q8IYI8 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms