Protein–RNA interactions for Protein: Q8IWN7

RP1L1, Retinitis pigmentosa 1-like 1 protein, humanhuman

Predicted RBP Predictions only

Length 2,480 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RP1L1Q8IWN7 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
RP1L1Q8IWN7 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RP1L1Q8IWN7 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RP1L1Q8IWN7 AL035633.1-201ENST00000406139 838 ntBASIC16.44■□□□□ 0.22
RP1L1Q8IWN7 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RP1L1Q8IWN7 UPF3AP3-201ENST00000420996 769 ntBASIC16.44■□□□□ 0.22
RP1L1Q8IWN7 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.44■□□□□ 0.22
RP1L1Q8IWN7 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.44■□□□□ 0.22
RP1L1Q8IWN7 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC16.44■□□□□ 0.22
RP1L1Q8IWN7 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.44■□□□□ 0.22
RP1L1Q8IWN7 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.44■□□□□ 0.22
RP1L1Q8IWN7 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RP1L1Q8IWN7 AP001269.4-201ENST00000609611 512 ntBASIC16.44■□□□□ 0.22
RP1L1Q8IWN7 MIR7706-201ENST00000613747 67 ntBASIC16.44■□□□□ 0.22
RP1L1Q8IWN7 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
RP1L1Q8IWN7 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
RP1L1Q8IWN7 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
RP1L1Q8IWN7 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RP1L1Q8IWN7 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
RP1L1Q8IWN7 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.43■□□□□ 0.22
RP1L1Q8IWN7 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RP1L1Q8IWN7 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC16.43■□□□□ 0.22
RP1L1Q8IWN7 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RP1L1Q8IWN7 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC16.43■□□□□ 0.22
RP1L1Q8IWN7 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC16.43■□□□□ 0.22
RP1L1Q8IWN7 ANKRD33B-201ENST00000296657 9188 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RP1L1Q8IWN7 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
RP1L1Q8IWN7 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.43■□□□□ 0.22
RP1L1Q8IWN7 DNAJB3-202ENST00000449667 1266 ntBASIC16.43■□□□□ 0.22
RP1L1Q8IWN7 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC16.43■□□□□ 0.22
RP1L1Q8IWN7 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.43■□□□□ 0.22
RP1L1Q8IWN7 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC16.43■□□□□ 0.22
RP1L1Q8IWN7 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RP1L1Q8IWN7 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.43■□□□□ 0.22
RP1L1Q8IWN7 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
RP1L1Q8IWN7 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RP1L1Q8IWN7 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.43■□□□□ 0.22
RP1L1Q8IWN7 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC16.43■□□□□ 0.22
RP1L1Q8IWN7 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
RP1L1Q8IWN7 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.43■□□□□ 0.22
RP1L1Q8IWN7 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.43■□□□□ 0.22
RP1L1Q8IWN7 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC16.43■□□□□ 0.22
RP1L1Q8IWN7 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.43■□□□□ 0.22
RP1L1Q8IWN7 IGHV3-41-201ENST00000613121 348 ntBASIC16.43■□□□□ 0.22
RP1L1Q8IWN7 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.43■□□□□ 0.22
RP1L1Q8IWN7 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RP1L1Q8IWN7 AC008735.5-201ENST00000623544 497 ntBASIC16.43■□□□□ 0.22
RP1L1Q8IWN7 AC083906.6-201ENST00000641366 219 ntBASIC16.43■□□□□ 0.22
RP1L1Q8IWN7 AC079781.4-201ENST00000641908 219 ntBASIC16.43■□□□□ 0.22
RP1L1Q8IWN7 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
RP1L1Q8IWN7 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RP1L1Q8IWN7 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
RP1L1Q8IWN7 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RP1L1Q8IWN7 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.43■□□□□ 0.22
RP1L1Q8IWN7 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
RP1L1Q8IWN7 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
RP1L1Q8IWN7 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC16.43■□□□□ 0.22
RP1L1Q8IWN7 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RP1L1Q8IWN7 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
RP1L1Q8IWN7 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
RP1L1Q8IWN7 RN7SL606P-201ENST00000472779 293 ntBASIC16.42■□□□□ 0.22
RP1L1Q8IWN7 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.42■□□□□ 0.22
RP1L1Q8IWN7 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RP1L1Q8IWN7 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC16.42■□□□□ 0.22
RP1L1Q8IWN7 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.42■□□□□ 0.22
RP1L1Q8IWN7 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RP1L1Q8IWN7 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.42■□□□□ 0.22
RP1L1Q8IWN7 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RP1L1Q8IWN7 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RP1L1Q8IWN7 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RP1L1Q8IWN7 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC16.42■□□□□ 0.22
RP1L1Q8IWN7 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
RP1L1Q8IWN7 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RP1L1Q8IWN7 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RP1L1Q8IWN7 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
RP1L1Q8IWN7 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC16.42■□□□□ 0.22
RP1L1Q8IWN7 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RP1L1Q8IWN7 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RP1L1Q8IWN7 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RP1L1Q8IWN7 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RP1L1Q8IWN7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RP1L1Q8IWN7 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
RP1L1Q8IWN7 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RP1L1Q8IWN7 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC16.42■□□□□ 0.22
RP1L1Q8IWN7 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RP1L1Q8IWN7 IMP4-203ENST00000409935 958 ntTSL 5 BASIC16.42■□□□□ 0.22
RP1L1Q8IWN7 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.42■□□□□ 0.22
RP1L1Q8IWN7 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC16.42■□□□□ 0.22
RP1L1Q8IWN7 PAM16-208ENST00000573553 722 ntTSL 2 BASIC16.42■□□□□ 0.22
RP1L1Q8IWN7 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC16.42■□□□□ 0.22
RP1L1Q8IWN7 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC16.42■□□□□ 0.22
RP1L1Q8IWN7 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
RP1L1Q8IWN7 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
RP1L1Q8IWN7 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
RP1L1Q8IWN7 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
RP1L1Q8IWN7 FZD10-202ENST00000539839 3282 ntBASIC16.42■□□□□ 0.22
RP1L1Q8IWN7 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.42■□□□□ 0.22
RP1L1Q8IWN7 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
RP1L1Q8IWN7 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC16.41■□□□□ 0.22
RP1L1Q8IWN7 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms