Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC50Q8IVM0 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC50Q8IVM0 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
CCDC50Q8IVM0 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC19.19■□□□□ 0.66
CCDC50Q8IVM0 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC19.19■□□□□ 0.66
CCDC50Q8IVM0 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
CCDC50Q8IVM0 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
CCDC50Q8IVM0 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.18■□□□□ 0.66
CCDC50Q8IVM0 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC50Q8IVM0 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC50Q8IVM0 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC50Q8IVM0 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC50Q8IVM0 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC50Q8IVM0 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC50Q8IVM0 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC50Q8IVM0 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
CCDC50Q8IVM0 UNC93B2-201ENST00000285383 730 ntBASIC19.18■□□□□ 0.66
CCDC50Q8IVM0 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CCDC50Q8IVM0 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.18■□□□□ 0.66
CCDC50Q8IVM0 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
CCDC50Q8IVM0 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC50Q8IVM0 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC19.18■□□□□ 0.66
CCDC50Q8IVM0 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
CCDC50Q8IVM0 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.18■□□□□ 0.66
CCDC50Q8IVM0 AL096828.2-201ENST00000567259 1965 ntBASIC19.18■□□□□ 0.66
CCDC50Q8IVM0 TNRC18P3-201ENST00000441896 2691 ntBASIC19.18■□□□□ 0.66
CCDC50Q8IVM0 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC50Q8IVM0 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC50Q8IVM0 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC50Q8IVM0 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC50Q8IVM0 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC50Q8IVM0 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC50Q8IVM0 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
CCDC50Q8IVM0 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC50Q8IVM0 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC50Q8IVM0 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC50Q8IVM0 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.18■□□□□ 0.66
CCDC50Q8IVM0 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC50Q8IVM0 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
CCDC50Q8IVM0 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC50Q8IVM0 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CCDC50Q8IVM0 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC50Q8IVM0 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC50Q8IVM0 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC50Q8IVM0 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC50Q8IVM0 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC50Q8IVM0 TNNC1-201ENST00000232975 714 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC50Q8IVM0 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.17■□□□□ 0.66
CCDC50Q8IVM0 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC50Q8IVM0 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC19.17■□□□□ 0.66
CCDC50Q8IVM0 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.17■□□□□ 0.66
CCDC50Q8IVM0 AP003041.3-201ENST00000527151 707 ntBASIC19.17■□□□□ 0.66
CCDC50Q8IVM0 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC50Q8IVM0 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC19.17■□□□□ 0.66
CCDC50Q8IVM0 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC19.17■□□□□ 0.66
CCDC50Q8IVM0 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CCDC50Q8IVM0 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC50Q8IVM0 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CCDC50Q8IVM0 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC50Q8IVM0 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC50Q8IVM0 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC50Q8IVM0 XKR4-203ENST00000622811 3907 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CCDC50Q8IVM0 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC50Q8IVM0 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC50Q8IVM0 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
CCDC50Q8IVM0 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC50Q8IVM0 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC50Q8IVM0 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC50Q8IVM0 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC50Q8IVM0 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC50Q8IVM0 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
CCDC50Q8IVM0 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.17■□□□□ 0.66
CCDC50Q8IVM0 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC19.17■□□□□ 0.66
CCDC50Q8IVM0 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
CCDC50Q8IVM0 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
CCDC50Q8IVM0 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC50Q8IVM0 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
CCDC50Q8IVM0 CYP51A1P1-201ENST00000492267 1507 ntBASIC19.16■□□□□ 0.66
CCDC50Q8IVM0 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
CCDC50Q8IVM0 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC50Q8IVM0 TSLP-203ENST00000420978 2621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC50Q8IVM0 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC50Q8IVM0 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC50Q8IVM0 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
CCDC50Q8IVM0 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC50Q8IVM0 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC50Q8IVM0 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC50Q8IVM0 MIR718-201ENST00000390190 70 ntBASIC19.16■□□□□ 0.66
CCDC50Q8IVM0 TSPY7P-201ENST00000431358 1114 ntBASIC19.16■□□□□ 0.66
CCDC50Q8IVM0 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC50Q8IVM0 RBM17P1-201ENST00000453646 1190 ntBASIC19.16■□□□□ 0.66
CCDC50Q8IVM0 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC50Q8IVM0 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.16■□□□□ 0.66
CCDC50Q8IVM0 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.16■□□□□ 0.66
CCDC50Q8IVM0 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC19.16■□□□□ 0.66
CCDC50Q8IVM0 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CCDC50Q8IVM0 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCDC50Q8IVM0 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.16■□□□□ 0.66
CCDC50Q8IVM0 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC19.16■□□□□ 0.66
CCDC50Q8IVM0 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 216.2 ms