Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.39■□□□□ 0.69
NPAS4Q8IUM7 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NPAS4Q8IUM7 COX5A-202ENST00000562233 441 ntTSL 3 BASIC19.39■□□□□ 0.69
NPAS4Q8IUM7 AC034105.1-201ENST00000563488 319 ntBASIC19.39■□□□□ 0.69
NPAS4Q8IUM7 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.39■□□□□ 0.69
NPAS4Q8IUM7 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.39■□□□□ 0.69
NPAS4Q8IUM7 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.39■□□□□ 0.69
NPAS4Q8IUM7 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NPAS4Q8IUM7 MTDHP4-201ENST00000600287 670 ntBASIC19.39■□□□□ 0.69
NPAS4Q8IUM7 AC140113.2-201ENST00000604370 208 ntBASIC19.39■□□□□ 0.69
NPAS4Q8IUM7 Z83851.2-201ENST00000609564 659 ntBASIC19.39■□□□□ 0.69
NPAS4Q8IUM7 AC097374.2-201ENST00000618617 1306 ntBASIC19.39■□□□□ 0.69
NPAS4Q8IUM7 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NPAS4Q8IUM7 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC19.39■□□□□ 0.69
NPAS4Q8IUM7 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NPAS4Q8IUM7 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
NPAS4Q8IUM7 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NPAS4Q8IUM7 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NPAS4Q8IUM7 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
NPAS4Q8IUM7 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
NPAS4Q8IUM7 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NPAS4Q8IUM7 AC005082.1-201ENST00000413042 2259 ntBASIC19.39■□□□□ 0.69
NPAS4Q8IUM7 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.39■□□□□ 0.69
NPAS4Q8IUM7 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NPAS4Q8IUM7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NPAS4Q8IUM7 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NPAS4Q8IUM7 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NPAS4Q8IUM7 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.38■□□□□ 0.69
NPAS4Q8IUM7 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
NPAS4Q8IUM7 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
NPAS4Q8IUM7 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NPAS4Q8IUM7 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NPAS4Q8IUM7 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC19.38■□□□□ 0.69
NPAS4Q8IUM7 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.38■□□□□ 0.69
NPAS4Q8IUM7 RNA5SP415-201ENST00000517246 115 ntBASIC19.38■□□□□ 0.69
NPAS4Q8IUM7 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
NPAS4Q8IUM7 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.38■□□□□ 0.69
NPAS4Q8IUM7 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.38■□□□□ 0.69
NPAS4Q8IUM7 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.38■□□□□ 0.69
NPAS4Q8IUM7 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC19.38■□□□□ 0.69
NPAS4Q8IUM7 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.38■□□□□ 0.69
NPAS4Q8IUM7 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NPAS4Q8IUM7 AC107918.4-202ENST00000641623 219 ntBASIC19.38■□□□□ 0.69
NPAS4Q8IUM7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.38■□□□□ 0.69
NPAS4Q8IUM7 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
NPAS4Q8IUM7 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NPAS4Q8IUM7 GMCL1P1-201ENST00000463439 1581 ntBASIC19.37■□□□□ 0.69
NPAS4Q8IUM7 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.37■□□□□ 0.69
NPAS4Q8IUM7 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.37■□□□□ 0.69
NPAS4Q8IUM7 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.37■□□□□ 0.69
NPAS4Q8IUM7 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
NPAS4Q8IUM7 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NPAS4Q8IUM7 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NPAS4Q8IUM7 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NPAS4Q8IUM7 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NPAS4Q8IUM7 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC19.37■□□□□ 0.69
NPAS4Q8IUM7 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NPAS4Q8IUM7 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NPAS4Q8IUM7 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC19.37■□□□□ 0.69
NPAS4Q8IUM7 AC007967.3-201ENST00000434308 558 ntBASIC19.37■□□□□ 0.69
NPAS4Q8IUM7 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.37■□□□□ 0.69
NPAS4Q8IUM7 AC105339.3-201ENST00000560043 636 ntBASIC19.37■□□□□ 0.69
NPAS4Q8IUM7 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NPAS4Q8IUM7 AL356488.2-201ENST00000602755 427 ntBASIC19.37■□□□□ 0.69
NPAS4Q8IUM7 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
NPAS4Q8IUM7 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC19.37■□□□□ 0.69
NPAS4Q8IUM7 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NPAS4Q8IUM7 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
NPAS4Q8IUM7 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
NPAS4Q8IUM7 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NPAS4Q8IUM7 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NPAS4Q8IUM7 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NPAS4Q8IUM7 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.36■□□□□ 0.69
NPAS4Q8IUM7 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
NPAS4Q8IUM7 TBC1D3P5-201ENST00000579401 1545 ntBASIC19.36■□□□□ 0.69
NPAS4Q8IUM7 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.36■□□□□ 0.69
NPAS4Q8IUM7 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NPAS4Q8IUM7 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
NPAS4Q8IUM7 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC19.36■□□□□ 0.69
NPAS4Q8IUM7 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
NPAS4Q8IUM7 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NPAS4Q8IUM7 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NPAS4Q8IUM7 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.36■□□□□ 0.69
NPAS4Q8IUM7 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NPAS4Q8IUM7 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.36■□□□□ 0.69
NPAS4Q8IUM7 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NPAS4Q8IUM7 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NPAS4Q8IUM7 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
NPAS4Q8IUM7 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NPAS4Q8IUM7 AC092183.1-201ENST00000469884 875 ntBASIC19.36■□□□□ 0.69
NPAS4Q8IUM7 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NPAS4Q8IUM7 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC19.36■□□□□ 0.69
NPAS4Q8IUM7 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.36■□□□□ 0.69
NPAS4Q8IUM7 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NPAS4Q8IUM7 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
NPAS4Q8IUM7 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NPAS4Q8IUM7 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
NPAS4Q8IUM7 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
NPAS4Q8IUM7 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NPAS4Q8IUM7 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 24 ms