Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM50Q86XT4 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM50Q86XT4 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC20.21■□□□□ 0.83
TRIM50Q86XT4 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM50Q86XT4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM50Q86XT4 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRIM50Q86XT4 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
TRIM50Q86XT4 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM50Q86XT4 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM50Q86XT4 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM50Q86XT4 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM50Q86XT4 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM50Q86XT4 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
TRIM50Q86XT4 CROCCP3-202ENST00000420820 1947 ntBASIC20.2■□□□□ 0.82
TRIM50Q86XT4 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC20.2■□□□□ 0.82
TRIM50Q86XT4 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM50Q86XT4 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM50Q86XT4 EMD-201ENST00000369835 966 ntTSL 3 BASIC20.2■□□□□ 0.82
TRIM50Q86XT4 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC20.2■□□□□ 0.82
TRIM50Q86XT4 MTCL1P1-201ENST00000446207 792 ntBASIC20.2■□□□□ 0.82
TRIM50Q86XT4 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC20.2■□□□□ 0.82
TRIM50Q86XT4 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.2■□□□□ 0.82
TRIM50Q86XT4 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC20.2■□□□□ 0.82
TRIM50Q86XT4 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC20.2■□□□□ 0.82
TRIM50Q86XT4 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM50Q86XT4 AC009154.2-201ENST00000621177 724 ntBASIC20.2■□□□□ 0.82
TRIM50Q86XT4 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM50Q86XT4 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
TRIM50Q86XT4 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM50Q86XT4 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC20.2■□□□□ 0.82
TRIM50Q86XT4 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM50Q86XT4 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
TRIM50Q86XT4 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRIM50Q86XT4 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
TRIM50Q86XT4 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.19■□□□□ 0.82
TRIM50Q86XT4 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC20.19■□□□□ 0.82
TRIM50Q86XT4 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.19■□□□□ 0.82
TRIM50Q86XT4 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM50Q86XT4 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM50Q86XT4 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM50Q86XT4 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
TRIM50Q86XT4 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM50Q86XT4 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
TRIM50Q86XT4 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
TRIM50Q86XT4 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.19■□□□□ 0.82
TRIM50Q86XT4 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.19■□□□□ 0.82
TRIM50Q86XT4 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM50Q86XT4 MIR5100-201ENST00000579544 119 ntBASIC20.19■□□□□ 0.82
TRIM50Q86XT4 AL591684.3-201ENST00000605187 298 ntBASIC20.19■□□□□ 0.82
TRIM50Q86XT4 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM50Q86XT4 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.19■□□□□ 0.82
TRIM50Q86XT4 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.19■□□□□ 0.82
TRIM50Q86XT4 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.19■□□□□ 0.82
TRIM50Q86XT4 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM50Q86XT4 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
TRIM50Q86XT4 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC20.19■□□□□ 0.82
TRIM50Q86XT4 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
TRIM50Q86XT4 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM50Q86XT4 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM50Q86XT4 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM50Q86XT4 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM50Q86XT4 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM50Q86XT4 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM50Q86XT4 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM50Q86XT4 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM50Q86XT4 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM50Q86XT4 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
TRIM50Q86XT4 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.18■□□□□ 0.82
TRIM50Q86XT4 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM50Q86XT4 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM50Q86XT4 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.18■□□□□ 0.82
TRIM50Q86XT4 RCN1P2-201ENST00000398357 915 ntBASIC20.18■□□□□ 0.82
TRIM50Q86XT4 POM121L3P-201ENST00000419331 1163 ntBASIC20.18■□□□□ 0.82
TRIM50Q86XT4 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM50Q86XT4 AC106795.1-205ENST00000512851 1056 ntBASIC20.18■□□□□ 0.82
TRIM50Q86XT4 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC20.18■□□□□ 0.82
TRIM50Q86XT4 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM50Q86XT4 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM50Q86XT4 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM50Q86XT4 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM50Q86XT4 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
TRIM50Q86XT4 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
TRIM50Q86XT4 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM50Q86XT4 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM50Q86XT4 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRIM50Q86XT4 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM50Q86XT4 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
TRIM50Q86XT4 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.17■□□□□ 0.82
TRIM50Q86XT4 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM50Q86XT4 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM50Q86XT4 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC20.17■□□□□ 0.82
TRIM50Q86XT4 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM50Q86XT4 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
TRIM50Q86XT4 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM50Q86XT4 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM50Q86XT4 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
TRIM50Q86XT4 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRIM50Q86XT4 AC079776.4-201ENST00000511039 504 ntBASIC20.17■□□□□ 0.82
TRIM50Q86XT4 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC20.17■□□□□ 0.82
TRIM50Q86XT4 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms