Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RTTNQ86VV8 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RTTNQ86VV8 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RTTNQ86VV8 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC16.04■□□□□ 0.16
RTTNQ86VV8 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC16.04■□□□□ 0.16
RTTNQ86VV8 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RTTNQ86VV8 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.04■□□□□ 0.16
RTTNQ86VV8 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RTTNQ86VV8 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RTTNQ86VV8 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
RTTNQ86VV8 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
RTTNQ86VV8 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.04■□□□□ 0.16
RTTNQ86VV8 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC16.04■□□□□ 0.16
RTTNQ86VV8 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RTTNQ86VV8 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
RTTNQ86VV8 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
RTTNQ86VV8 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
RTTNQ86VV8 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.04■□□□□ 0.16
RTTNQ86VV8 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.04■□□□□ 0.16
RTTNQ86VV8 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.04■□□□□ 0.16
RTTNQ86VV8 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RTTNQ86VV8 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC16.04■□□□□ 0.16
RTTNQ86VV8 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RTTNQ86VV8 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RTTNQ86VV8 PTGER3-202ENST00000351052 1404 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
RTTNQ86VV8 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RTTNQ86VV8 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
RTTNQ86VV8 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.04■□□□□ 0.16
RTTNQ86VV8 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RTTNQ86VV8 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RTTNQ86VV8 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
RTTNQ86VV8 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
RTTNQ86VV8 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
RTTNQ86VV8 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTTNQ86VV8 SDHAP2-201ENST00000455183 2001 ntBASIC16.03■□□□□ 0.16
RTTNQ86VV8 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.03■□□□□ 0.16
RTTNQ86VV8 AP000523.1-201ENST00000398242 1049 ntBASIC16.03■□□□□ 0.16
RTTNQ86VV8 COX11P1-201ENST00000489116 835 ntBASIC16.03■□□□□ 0.16
RTTNQ86VV8 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTTNQ86VV8 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RTTNQ86VV8 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RTTNQ86VV8 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.03■□□□□ 0.16
RTTNQ86VV8 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.03■□□□□ 0.16
RTTNQ86VV8 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTTNQ86VV8 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTTNQ86VV8 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTTNQ86VV8 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTTNQ86VV8 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTTNQ86VV8 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RTTNQ86VV8 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC16.03■□□□□ 0.16
RTTNQ86VV8 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RTTNQ86VV8 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTTNQ86VV8 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC16.03■□□□□ 0.16
RTTNQ86VV8 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RTTNQ86VV8 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
RTTNQ86VV8 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RTTNQ86VV8 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
RTTNQ86VV8 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.03■□□□□ 0.16
RTTNQ86VV8 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RTTNQ86VV8 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RTTNQ86VV8 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTTNQ86VV8 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTTNQ86VV8 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
RTTNQ86VV8 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.03■□□□□ 0.16
RTTNQ86VV8 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RTTNQ86VV8 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTTNQ86VV8 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTTNQ86VV8 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
RTTNQ86VV8 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTTNQ86VV8 ELP6-205ENST00000439305 880 ntTSL 2 BASIC16.03■□□□□ 0.16
RTTNQ86VV8 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTTNQ86VV8 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTTNQ86VV8 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTTNQ86VV8 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTTNQ86VV8 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.03■□□□□ 0.16
RTTNQ86VV8 AC083849.1-201ENST00000615227 514 ntBASIC16.03■□□□□ 0.16
RTTNQ86VV8 AC139530.3-201ENST00000620344 690 ntBASIC16.03■□□□□ 0.16
RTTNQ86VV8 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTTNQ86VV8 AL390961.4-201ENST00000623958 2535 ntBASIC16.03■□□□□ 0.16
RTTNQ86VV8 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
RTTNQ86VV8 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RTTNQ86VV8 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
RTTNQ86VV8 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTTNQ86VV8 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTTNQ86VV8 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
RTTNQ86VV8 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.03■□□□□ 0.16
RTTNQ86VV8 AL163051.1-201ENST00000569214 1512 ntBASIC16.03■□□□□ 0.16
RTTNQ86VV8 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTTNQ86VV8 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
RTTNQ86VV8 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
RTTNQ86VV8 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RTTNQ86VV8 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RTTNQ86VV8 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RTTNQ86VV8 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC16.02■□□□□ 0.16
RTTNQ86VV8 AC005332.1-201ENST00000577698 1310 ntBASIC16.02■□□□□ 0.16
RTTNQ86VV8 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
RTTNQ86VV8 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
RTTNQ86VV8 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.02■□□□□ 0.16
RTTNQ86VV8 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC16.02■□□□□ 0.16
RTTNQ86VV8 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 25.6 ms