Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC15.43■□□□□ 0.06
RAI1Q7Z5J4 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC15.43■□□□□ 0.06
RAI1Q7Z5J4 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RAI1Q7Z5J4 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RAI1Q7Z5J4 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC15.43■□□□□ 0.06
RAI1Q7Z5J4 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC15.43■□□□□ 0.06
RAI1Q7Z5J4 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RAI1Q7Z5J4 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC15.43■□□□□ 0.06
RAI1Q7Z5J4 DANCR-204ENST00000444958 709 ntTSL 3 BASIC15.43■□□□□ 0.06
RAI1Q7Z5J4 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC15.43■□□□□ 0.06
RAI1Q7Z5J4 POLD2P1-201ENST00000511220 997 ntBASIC15.43■□□□□ 0.06
RAI1Q7Z5J4 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
RAI1Q7Z5J4 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC15.43■□□□□ 0.06
RAI1Q7Z5J4 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC15.43■□□□□ 0.06
RAI1Q7Z5J4 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC15.43■□□□□ 0.06
RAI1Q7Z5J4 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RAI1Q7Z5J4 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RAI1Q7Z5J4 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAI1Q7Z5J4 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAI1Q7Z5J4 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAI1Q7Z5J4 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC15.42■□□□□ 0.06
RAI1Q7Z5J4 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RAI1Q7Z5J4 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC15.42■□□□□ 0.06
RAI1Q7Z5J4 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAI1Q7Z5J4 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15.42■□□□□ 0.06
RAI1Q7Z5J4 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC15.42■□□□□ 0.06
RAI1Q7Z5J4 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAI1Q7Z5J4 ADK-206ENST00000541550 2222 ntTSL 2 BASIC15.42■□□□□ 0.06
RAI1Q7Z5J4 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RAI1Q7Z5J4 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
RAI1Q7Z5J4 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAI1Q7Z5J4 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
RAI1Q7Z5J4 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
RAI1Q7Z5J4 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC15.42■□□□□ 0.06
RAI1Q7Z5J4 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RAI1Q7Z5J4 COX10-202ENST00000429152 875 ntTSL 2 BASIC15.42■□□□□ 0.06
RAI1Q7Z5J4 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC15.42■□□□□ 0.06
RAI1Q7Z5J4 MIR5100-201ENST00000579544 119 ntBASIC15.42■□□□□ 0.06
RAI1Q7Z5J4 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.42■□□□□ 0.06
RAI1Q7Z5J4 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
RAI1Q7Z5J4 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RAI1Q7Z5J4 TP73-AS1-210ENST00000637775 1455 ntBASIC15.42■□□□□ 0.06
RAI1Q7Z5J4 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC15.42■□□□□ 0.06
RAI1Q7Z5J4 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RAI1Q7Z5J4 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
RAI1Q7Z5J4 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAI1Q7Z5J4 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RAI1Q7Z5J4 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAI1Q7Z5J4 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAI1Q7Z5J4 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC15.42■□□□□ 0.06
RAI1Q7Z5J4 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAI1Q7Z5J4 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC15.42■□□□□ 0.06
RAI1Q7Z5J4 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.42■□□□□ 0.06
RAI1Q7Z5J4 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
RAI1Q7Z5J4 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RAI1Q7Z5J4 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC15.41■□□□□ 0.06
RAI1Q7Z5J4 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC15.41■□□□□ 0.06
RAI1Q7Z5J4 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RAI1Q7Z5J4 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
RAI1Q7Z5J4 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAI1Q7Z5J4 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAI1Q7Z5J4 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
RAI1Q7Z5J4 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC15.41■□□□□ 0.06
RAI1Q7Z5J4 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RAI1Q7Z5J4 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC15.41■□□□□ 0.06
RAI1Q7Z5J4 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC15.41■□□□□ 0.06
RAI1Q7Z5J4 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC15.41■□□□□ 0.06
RAI1Q7Z5J4 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC15.41■□□□□ 0.06
RAI1Q7Z5J4 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAI1Q7Z5J4 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC15.41■□□□□ 0.06
RAI1Q7Z5J4 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC15.41■□□□□ 0.06
RAI1Q7Z5J4 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RAI1Q7Z5J4 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RAI1Q7Z5J4 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAI1Q7Z5J4 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAI1Q7Z5J4 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAI1Q7Z5J4 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RAI1Q7Z5J4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAI1Q7Z5J4 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAI1Q7Z5J4 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAI1Q7Z5J4 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
RAI1Q7Z5J4 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC15.41■□□□□ 0.06
RAI1Q7Z5J4 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RAI1Q7Z5J4 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC15.41■□□□□ 0.06
RAI1Q7Z5J4 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAI1Q7Z5J4 KRT18P13-201ENST00000400056 1290 ntBASIC15.41■□□□□ 0.06
RAI1Q7Z5J4 HIST2H3DP1-201ENST00000401004 416 ntBASIC15.41■□□□□ 0.06
RAI1Q7Z5J4 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
RAI1Q7Z5J4 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC15.41■□□□□ 0.06
RAI1Q7Z5J4 ABCD1P5-201ENST00000445663 754 ntBASIC15.41■□□□□ 0.06
RAI1Q7Z5J4 AC009154.2-201ENST00000621177 724 ntBASIC15.41■□□□□ 0.06
RAI1Q7Z5J4 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAI1Q7Z5J4 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
RAI1Q7Z5J4 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC15.41■□□□□ 0.06
RAI1Q7Z5J4 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
RAI1Q7Z5J4 ESPNP-201ENST00000270691 2015 ntBASIC15.41■□□□□ 0.06
RAI1Q7Z5J4 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC15.4■□□□□ 0.06
RAI1Q7Z5J4 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAI1Q7Z5J4 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
RAI1Q7Z5J4 MYLKP1-201ENST00000509077 1580 ntBASIC15.4■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms