Protein–RNA interactions for Protein: Q6Q0C0

TRAF7, E3 ubiquitin-protein ligase TRAF7, humanhuman

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF7Q6Q0C0 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAF7Q6Q0C0 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.72■□□□□ 0.75
TRAF7Q6Q0C0 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.72■□□□□ 0.75
TRAF7Q6Q0C0 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.72■□□□□ 0.75
TRAF7Q6Q0C0 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
TRAF7Q6Q0C0 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.72■□□□□ 0.75
TRAF7Q6Q0C0 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.72■□□□□ 0.75
TRAF7Q6Q0C0 AC140113.2-201ENST00000604370 208 ntBASIC19.72■□□□□ 0.75
TRAF7Q6Q0C0 AP000867.4-201ENST00000641616 219 ntBASIC19.72■□□□□ 0.75
TRAF7Q6Q0C0 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
TRAF7Q6Q0C0 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
TRAF7Q6Q0C0 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
TRAF7Q6Q0C0 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
TRAF7Q6Q0C0 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC19.72■□□□□ 0.75
TRAF7Q6Q0C0 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRAF7Q6Q0C0 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC19.71■□□□□ 0.75
TRAF7Q6Q0C0 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRAF7Q6Q0C0 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC19.71■□□□□ 0.75
TRAF7Q6Q0C0 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.71■□□□□ 0.75
TRAF7Q6Q0C0 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TRAF7Q6Q0C0 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.71■□□□□ 0.75
TRAF7Q6Q0C0 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
TRAF7Q6Q0C0 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAF7Q6Q0C0 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
TRAF7Q6Q0C0 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.71■□□□□ 0.75
TRAF7Q6Q0C0 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.71■□□□□ 0.75
TRAF7Q6Q0C0 OR7E14P-202ENST00000530490 1290 ntBASIC19.71■□□□□ 0.75
TRAF7Q6Q0C0 NKAPP1-205ENST00000585790 367 ntBASIC19.71■□□□□ 0.75
TRAF7Q6Q0C0 AC027601.4-201ENST00000611259 610 ntBASIC19.71■□□□□ 0.75
TRAF7Q6Q0C0 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
TRAF7Q6Q0C0 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC19.71■□□□□ 0.75
TRAF7Q6Q0C0 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAF7Q6Q0C0 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
TRAF7Q6Q0C0 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.71■□□□□ 0.75
TRAF7Q6Q0C0 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
TRAF7Q6Q0C0 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC19.71■□□□□ 0.74
TRAF7Q6Q0C0 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAF7Q6Q0C0 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
TRAF7Q6Q0C0 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC19.7■□□□□ 0.74
TRAF7Q6Q0C0 HLA-J-201ENST00000462773 1622 ntBASIC19.7■□□□□ 0.74
TRAF7Q6Q0C0 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAF7Q6Q0C0 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
TRAF7Q6Q0C0 SOD2-201ENST00000337404 991 ntTSL 2 BASIC19.7■□□□□ 0.74
TRAF7Q6Q0C0 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.7■□□□□ 0.74
TRAF7Q6Q0C0 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAF7Q6Q0C0 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
TRAF7Q6Q0C0 AC005104.2-201ENST00000427818 678 ntBASIC19.7■□□□□ 0.74
TRAF7Q6Q0C0 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC19.7■□□□□ 0.74
TRAF7Q6Q0C0 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC19.7■□□□□ 0.74
TRAF7Q6Q0C0 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
TRAF7Q6Q0C0 AC092910.1-201ENST00000482027 1129 ntBASIC19.7■□□□□ 0.74
TRAF7Q6Q0C0 RNA5SP415-201ENST00000517246 115 ntBASIC19.7■□□□□ 0.74
TRAF7Q6Q0C0 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC19.7■□□□□ 0.74
TRAF7Q6Q0C0 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.7■□□□□ 0.74
TRAF7Q6Q0C0 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC19.7■□□□□ 0.74
TRAF7Q6Q0C0 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC19.7■□□□□ 0.74
TRAF7Q6Q0C0 AL356488.2-201ENST00000602755 427 ntBASIC19.7■□□□□ 0.74
TRAF7Q6Q0C0 AC055717.3-201ENST00000622967 595 ntBASIC19.7■□□□□ 0.74
TRAF7Q6Q0C0 AL139288.1-201ENST00000623748 933 ntBASIC19.7■□□□□ 0.74
TRAF7Q6Q0C0 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.7■□□□□ 0.74
TRAF7Q6Q0C0 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.7■□□□□ 0.74
TRAF7Q6Q0C0 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAF7Q6Q0C0 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAF7Q6Q0C0 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
TRAF7Q6Q0C0 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
TRAF7Q6Q0C0 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAF7Q6Q0C0 AC005082.1-201ENST00000413042 2259 ntBASIC19.69■□□□□ 0.74
TRAF7Q6Q0C0 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAF7Q6Q0C0 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAF7Q6Q0C0 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
TRAF7Q6Q0C0 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAF7Q6Q0C0 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAF7Q6Q0C0 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
TRAF7Q6Q0C0 CENPM-204ENST00000402420 688 ntTSL 5 BASIC19.69■□□□□ 0.74
TRAF7Q6Q0C0 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC19.69■□□□□ 0.74
TRAF7Q6Q0C0 NMU-202ENST00000505262 693 ntTSL 3 BASIC19.69■□□□□ 0.74
TRAF7Q6Q0C0 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC19.69■□□□□ 0.74
TRAF7Q6Q0C0 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.69■□□□□ 0.74
TRAF7Q6Q0C0 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAF7Q6Q0C0 FAM197Y3-203ENST00000618346 717 ntBASIC19.69■□□□□ 0.74
TRAF7Q6Q0C0 AC008735.5-201ENST00000623544 497 ntBASIC19.69■□□□□ 0.74
TRAF7Q6Q0C0 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC19.69■□□□□ 0.74
TRAF7Q6Q0C0 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.69■□□□□ 0.74
TRAF7Q6Q0C0 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAF7Q6Q0C0 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
TRAF7Q6Q0C0 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.68■□□□□ 0.74
TRAF7Q6Q0C0 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
TRAF7Q6Q0C0 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAF7Q6Q0C0 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC19.68■□□□□ 0.74
TRAF7Q6Q0C0 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAF7Q6Q0C0 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
TRAF7Q6Q0C0 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
TRAF7Q6Q0C0 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC19.68■□□□□ 0.74
TRAF7Q6Q0C0 IMP4-203ENST00000409935 958 ntTSL 5 BASIC19.68■□□□□ 0.74
TRAF7Q6Q0C0 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC19.68■□□□□ 0.74
TRAF7Q6Q0C0 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC19.68■□□□□ 0.74
TRAF7Q6Q0C0 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.68■□□□□ 0.74
TRAF7Q6Q0C0 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC19.68■□□□□ 0.74
TRAF7Q6Q0C0 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC19.68■□□□□ 0.74
TRAF7Q6Q0C0 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms