Protein–RNA interactions for Protein: Q6P4E1

CASC4, Protein CASC4, humanhuman

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4Q6P4E1 CR769767.2-201ENST00000622735 460 ntBASIC18.55■□□□□ 0.56
CASC4Q6P4E1 TMEM191A-211ENST00000637163 1067 ntBASIC18.55■□□□□ 0.56
CASC4Q6P4E1 AP006294.2-201ENST00000641667 209 ntBASIC18.55■□□□□ 0.56
CASC4Q6P4E1 AC116562.4-202ENST00000641738 218 ntBASIC18.55■□□□□ 0.56
CASC4Q6P4E1 SDHAP2-201ENST00000455183 2001 ntBASIC18.55■□□□□ 0.56
CASC4Q6P4E1 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC18.55■□□□□ 0.56
CASC4Q6P4E1 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CASC4Q6P4E1 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.55■□□□□ 0.56
CASC4Q6P4E1 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CASC4Q6P4E1 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CASC4Q6P4E1 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.55■□□□□ 0.56
CASC4Q6P4E1 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CASC4Q6P4E1 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CASC4Q6P4E1 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CASC4Q6P4E1 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.54■□□□□ 0.56
CASC4Q6P4E1 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CASC4Q6P4E1 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.54■□□□□ 0.56
CASC4Q6P4E1 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.54■□□□□ 0.56
CASC4Q6P4E1 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.54■□□□□ 0.56
CASC4Q6P4E1 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.54■□□□□ 0.56
CASC4Q6P4E1 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CASC4Q6P4E1 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CASC4Q6P4E1 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
CASC4Q6P4E1 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CASC4Q6P4E1 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CASC4Q6P4E1 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CASC4Q6P4E1 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CASC4Q6P4E1 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CASC4Q6P4E1 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.54■□□□□ 0.56
CASC4Q6P4E1 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC18.54■□□□□ 0.56
CASC4Q6P4E1 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CASC4Q6P4E1 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.54■□□□□ 0.56
CASC4Q6P4E1 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CASC4Q6P4E1 FITM1-202ENST00000559294 800 ntBASIC18.54■□□□□ 0.56
CASC4Q6P4E1 C2orf69P3-201ENST00000565542 1120 ntBASIC18.54■□□□□ 0.56
CASC4Q6P4E1 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.54■□□□□ 0.56
CASC4Q6P4E1 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC18.54■□□□□ 0.56
CASC4Q6P4E1 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.54■□□□□ 0.56
CASC4Q6P4E1 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.54■□□□□ 0.56
CASC4Q6P4E1 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
CASC4Q6P4E1 HOXB1-202ENST00000577092 1414 ntBASIC18.54■□□□□ 0.56
CASC4Q6P4E1 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CASC4Q6P4E1 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CASC4Q6P4E1 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CASC4Q6P4E1 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CASC4Q6P4E1 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CASC4Q6P4E1 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CASC4Q6P4E1 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC18.54■□□□□ 0.56
CASC4Q6P4E1 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.54■□□□□ 0.56
CASC4Q6P4E1 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.54■□□□□ 0.56
CASC4Q6P4E1 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CASC4Q6P4E1 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC18.54■□□□□ 0.56
CASC4Q6P4E1 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CASC4Q6P4E1 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC18.53■□□□□ 0.56
CASC4Q6P4E1 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CASC4Q6P4E1 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CASC4Q6P4E1 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CASC4Q6P4E1 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CASC4Q6P4E1 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.53■□□□□ 0.56
CASC4Q6P4E1 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CASC4Q6P4E1 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CASC4Q6P4E1 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CASC4Q6P4E1 STK4-201ENST00000372801 2038 ntTSL 2 BASIC18.53■□□□□ 0.56
CASC4Q6P4E1 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CASC4Q6P4E1 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
CASC4Q6P4E1 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CASC4Q6P4E1 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC18.53■□□□□ 0.56
CASC4Q6P4E1 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CASC4Q6P4E1 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CASC4Q6P4E1 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.53■□□□□ 0.56
CASC4Q6P4E1 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC18.53■□□□□ 0.56
CASC4Q6P4E1 LTB4R2-202ENST00000528054 3092 ntBASIC18.53■□□□□ 0.56
CASC4Q6P4E1 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC18.53■□□□□ 0.56
CASC4Q6P4E1 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CASC4Q6P4E1 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CASC4Q6P4E1 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.53■□□□□ 0.56
CASC4Q6P4E1 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CASC4Q6P4E1 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CASC4Q6P4E1 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CASC4Q6P4E1 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CASC4Q6P4E1 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
CASC4Q6P4E1 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CASC4Q6P4E1 FLJ13224-201ENST00000313737 1514 ntBASIC18.53■□□□□ 0.56
CASC4Q6P4E1 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CASC4Q6P4E1 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC18.53■□□□□ 0.56
CASC4Q6P4E1 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CASC4Q6P4E1 KRT17P2-201ENST00000300992 1314 ntBASIC18.52■□□□□ 0.56
CASC4Q6P4E1 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CASC4Q6P4E1 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CASC4Q6P4E1 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.52■□□□□ 0.56
CASC4Q6P4E1 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.52■□□□□ 0.56
CASC4Q6P4E1 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC18.52■□□□□ 0.56
CASC4Q6P4E1 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CASC4Q6P4E1 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CASC4Q6P4E1 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
CASC4Q6P4E1 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
CASC4Q6P4E1 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CASC4Q6P4E1 KRT8P7-201ENST00000533003 1432 ntBASIC18.52■□□□□ 0.56
CASC4Q6P4E1 AC092338.2-201ENST00000568827 1415 ntBASIC18.52■□□□□ 0.56
CASC4Q6P4E1 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms