Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL13A1Q5TAT6 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COL13A1Q5TAT6 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL13A1Q5TAT6 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
COL13A1Q5TAT6 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL13A1Q5TAT6 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
COL13A1Q5TAT6 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL13A1Q5TAT6 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COL13A1Q5TAT6 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.25■□□□□ 0.83
COL13A1Q5TAT6 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
COL13A1Q5TAT6 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.83
COL13A1Q5TAT6 AL512384.1-201ENST00000406683 331 ntBASIC20.25■□□□□ 0.83
COL13A1Q5TAT6 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC20.25■□□□□ 0.83
COL13A1Q5TAT6 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
COL13A1Q5TAT6 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
COL13A1Q5TAT6 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC20.25■□□□□ 0.83
COL13A1Q5TAT6 AC112191.1-201ENST00000523689 701 ntBASIC20.25■□□□□ 0.83
COL13A1Q5TAT6 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC20.25■□□□□ 0.83
COL13A1Q5TAT6 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC20.25■□□□□ 0.83
COL13A1Q5TAT6 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL13A1Q5TAT6 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC20.25■□□□□ 0.83
COL13A1Q5TAT6 AC084121.4-201ENST00000641598 221 ntBASIC20.25■□□□□ 0.83
COL13A1Q5TAT6 AF228730.8-201ENST00000642140 221 ntBASIC20.25■□□□□ 0.83
COL13A1Q5TAT6 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20.25■□□□□ 0.83
COL13A1Q5TAT6 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
COL13A1Q5TAT6 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC20.25■□□□□ 0.83
COL13A1Q5TAT6 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL13A1Q5TAT6 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COL13A1Q5TAT6 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL13A1Q5TAT6 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL13A1Q5TAT6 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC20.25■□□□□ 0.83
COL13A1Q5TAT6 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL13A1Q5TAT6 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
COL13A1Q5TAT6 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
COL13A1Q5TAT6 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
COL13A1Q5TAT6 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL13A1Q5TAT6 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
COL13A1Q5TAT6 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL13A1Q5TAT6 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL13A1Q5TAT6 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL13A1Q5TAT6 ACTBP11-201ENST00000436287 1126 ntBASIC20.24■□□□□ 0.83
COL13A1Q5TAT6 RNA5SP423-201ENST00000517127 109 ntBASIC20.24■□□□□ 0.83
COL13A1Q5TAT6 PRR29-204ENST00000577953 565 ntTSL 4 BASIC20.24■□□□□ 0.83
COL13A1Q5TAT6 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL13A1Q5TAT6 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.24■□□□□ 0.83
COL13A1Q5TAT6 ZNF815P-204ENST00000434898 1737 ntBASIC20.24■□□□□ 0.83
COL13A1Q5TAT6 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL13A1Q5TAT6 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.24■□□□□ 0.83
COL13A1Q5TAT6 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COL13A1Q5TAT6 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL13A1Q5TAT6 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC20.23■□□□□ 0.83
COL13A1Q5TAT6 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC20.23■□□□□ 0.83
COL13A1Q5TAT6 KAT5-201ENST00000341318 2296 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COL13A1Q5TAT6 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL13A1Q5TAT6 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL13A1Q5TAT6 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC20.23■□□□□ 0.83
COL13A1Q5TAT6 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COL13A1Q5TAT6 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL13A1Q5TAT6 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC20.23■□□□□ 0.83
COL13A1Q5TAT6 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
COL13A1Q5TAT6 AC241585.1-201ENST00000433527 519 ntBASIC20.23■□□□□ 0.83
COL13A1Q5TAT6 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COL13A1Q5TAT6 SPDYE11-202ENST00000450699 704 ntBASIC20.23■□□□□ 0.83
COL13A1Q5TAT6 AC119751.2-201ENST00000504529 210 ntBASIC20.23■□□□□ 0.83
COL13A1Q5TAT6 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC20.23■□□□□ 0.83
COL13A1Q5TAT6 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC20.23■□□□□ 0.83
COL13A1Q5TAT6 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC20.23■□□□□ 0.83
COL13A1Q5TAT6 SPDYE9P-201ENST00000570642 692 ntBASIC20.23■□□□□ 0.83
COL13A1Q5TAT6 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC20.23■□□□□ 0.83
COL13A1Q5TAT6 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC20.23■□□□□ 0.83
COL13A1Q5TAT6 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC20.23■□□□□ 0.83
COL13A1Q5TAT6 SPDYE10P-202ENST00000612005 668 ntBASIC20.23■□□□□ 0.83
COL13A1Q5TAT6 SPDYE8P-202ENST00000612377 668 ntBASIC20.23■□□□□ 0.83
COL13A1Q5TAT6 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC20.23■□□□□ 0.83
COL13A1Q5TAT6 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COL13A1Q5TAT6 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
COL13A1Q5TAT6 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC20.23■□□□□ 0.83
COL13A1Q5TAT6 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.23■□□□□ 0.83
COL13A1Q5TAT6 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
COL13A1Q5TAT6 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
COL13A1Q5TAT6 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL13A1Q5TAT6 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.22■□□□□ 0.83
COL13A1Q5TAT6 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.22■□□□□ 0.83
COL13A1Q5TAT6 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC20.22■□□□□ 0.83
COL13A1Q5TAT6 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL13A1Q5TAT6 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL13A1Q5TAT6 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL13A1Q5TAT6 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.22■□□□□ 0.83
COL13A1Q5TAT6 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
COL13A1Q5TAT6 MPV17-208ENST00000405076 603 ntTSL 5 BASIC20.22■□□□□ 0.83
COL13A1Q5TAT6 POLE2-203ENST00000553805 496 ntTSL 2 BASIC20.22■□□□□ 0.83
COL13A1Q5TAT6 COG4-212ENST00000564653 590 ntTSL 5 BASIC20.22■□□□□ 0.83
COL13A1Q5TAT6 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL13A1Q5TAT6 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC20.22■□□□□ 0.83
COL13A1Q5TAT6 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
COL13A1Q5TAT6 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
COL13A1Q5TAT6 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
COL13A1Q5TAT6 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC20.22■□□□□ 0.83
COL13A1Q5TAT6 MIR6869-201ENST00000619434 62 ntBASIC20.22■□□□□ 0.83
COL13A1Q5TAT6 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms