Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC29.49■■■□□ 2.31
SNAPC4Q5SXM2 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC29.49■■■□□ 2.31
SNAPC4Q5SXM2 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC29.48■■■□□ 2.31
SNAPC4Q5SXM2 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
SNAPC4Q5SXM2 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
SNAPC4Q5SXM2 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC29.48■■■□□ 2.31
SNAPC4Q5SXM2 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
SNAPC4Q5SXM2 COX5A-202ENST00000562233 441 ntTSL 3 BASIC29.48■■■□□ 2.31
SNAPC4Q5SXM2 AL513210.1-201ENST00000629608 234 ntBASIC29.48■■■□□ 2.31
SNAPC4Q5SXM2 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
SNAPC4Q5SXM2 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC29.48■■■□□ 2.31
SNAPC4Q5SXM2 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC29.48■■■□□ 2.31
SNAPC4Q5SXM2 ADM-208ENST00000534464 1640 ntTSL 2 BASIC29.48■■■□□ 2.31
SNAPC4Q5SXM2 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC29.48■■■□□ 2.31
SNAPC4Q5SXM2 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC29.48■■■□□ 2.31
SNAPC4Q5SXM2 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC29.48■■■□□ 2.31
SNAPC4Q5SXM2 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC29.48■■■□□ 2.31
SNAPC4Q5SXM2 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
SNAPC4Q5SXM2 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC29.48■■■□□ 2.31
SNAPC4Q5SXM2 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC29.48■■■□□ 2.31
SNAPC4Q5SXM2 AC104135.1-201ENST00000418001 763 ntTSL 5 BASIC29.48■■■□□ 2.31
SNAPC4Q5SXM2 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC29.48■■■□□ 2.31
SNAPC4Q5SXM2 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC29.48■■■□□ 2.31
SNAPC4Q5SXM2 RIN3-211ENST00000557762 517 ntTSL 3 BASIC29.48■■■□□ 2.31
SNAPC4Q5SXM2 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC29.48■■■□□ 2.31
SNAPC4Q5SXM2 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC29.47■■■□□ 2.31
SNAPC4Q5SXM2 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
SNAPC4Q5SXM2 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC29.47■■■□□ 2.31
SNAPC4Q5SXM2 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC29.47■■■□□ 2.31
SNAPC4Q5SXM2 ZFPL1-201ENST00000294258 1371 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
SNAPC4Q5SXM2 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC29.47■■■□□ 2.31
SNAPC4Q5SXM2 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC29.47■■■□□ 2.31
SNAPC4Q5SXM2 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC29.47■■■□□ 2.31
SNAPC4Q5SXM2 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
SNAPC4Q5SXM2 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC29.47■■■□□ 2.31
SNAPC4Q5SXM2 FBXO44-205ENST00000376768 959 ntTSL 2 BASIC29.47■■■□□ 2.31
SNAPC4Q5SXM2 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
SNAPC4Q5SXM2 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC29.47■■■□□ 2.31
SNAPC4Q5SXM2 TRMT112-202ENST00000535126 704 ntTSL 2 BASIC29.47■■■□□ 2.31
SNAPC4Q5SXM2 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC29.47■■■□□ 2.31
SNAPC4Q5SXM2 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC29.47■■■□□ 2.31
SNAPC4Q5SXM2 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC29.47■■■□□ 2.31
SNAPC4Q5SXM2 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC29.47■■■□□ 2.31
SNAPC4Q5SXM2 POLI-202ENST00000406285 2030 ntTSL 2 BASIC29.47■■■□□ 2.31
SNAPC4Q5SXM2 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC29.46■■■□□ 2.31
SNAPC4Q5SXM2 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC29.46■■■□□ 2.31
SNAPC4Q5SXM2 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
SNAPC4Q5SXM2 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC29.46■■■□□ 2.31
SNAPC4Q5SXM2 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
SNAPC4Q5SXM2 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC29.46■■■□□ 2.31
SNAPC4Q5SXM2 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC29.46■■■□□ 2.31
SNAPC4Q5SXM2 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
SNAPC4Q5SXM2 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC29.46■■■□□ 2.31
SNAPC4Q5SXM2 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC29.46■■■□□ 2.31
SNAPC4Q5SXM2 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
SNAPC4Q5SXM2 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC29.46■■■□□ 2.31
SNAPC4Q5SXM2 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
SNAPC4Q5SXM2 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC29.46■■■□□ 2.31
SNAPC4Q5SXM2 FAM58CP-201ENST00000435741 640 ntBASIC29.46■■■□□ 2.31
SNAPC4Q5SXM2 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC29.46■■■□□ 2.31
SNAPC4Q5SXM2 RPS15P9-201ENST00000494093 319 ntBASIC29.46■■■□□ 2.31
SNAPC4Q5SXM2 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
SNAPC4Q5SXM2 RBM7-207ENST00000544582 692 ntTSL 3 BASIC29.46■■■□□ 2.31
SNAPC4Q5SXM2 AC010654.1-201ENST00000615722 808 ntBASIC29.46■■■□□ 2.31
SNAPC4Q5SXM2 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
SNAPC4Q5SXM2 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC29.46■■■□□ 2.31
SNAPC4Q5SXM2 MAG-202ENST00000392213 2390 ntAPPRIS P4 TSL 1 (best) BASIC29.46■■■□□ 2.31
SNAPC4Q5SXM2 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC29.46■■■□□ 2.31
SNAPC4Q5SXM2 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC29.46■■■□□ 2.31
SNAPC4Q5SXM2 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC29.45■■■□□ 2.31
SNAPC4Q5SXM2 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
SNAPC4Q5SXM2 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
SNAPC4Q5SXM2 MYLKP1-201ENST00000509077 1580 ntBASIC29.45■■■□□ 2.31
SNAPC4Q5SXM2 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
SNAPC4Q5SXM2 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC29.45■■■□□ 2.31
SNAPC4Q5SXM2 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC29.45■■■□□ 2.31
SNAPC4Q5SXM2 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC29.45■■■□□ 2.31
SNAPC4Q5SXM2 AC092474.2-201ENST00000424288 719 ntBASIC29.45■■■□□ 2.31
SNAPC4Q5SXM2 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC29.45■■■□□ 2.31
SNAPC4Q5SXM2 AC122714.2-201ENST00000502787 707 ntBASIC29.45■■■□□ 2.31
SNAPC4Q5SXM2 CCND1-203ENST00000536559 553 ntTSL 3 BASIC29.45■■■□□ 2.31
SNAPC4Q5SXM2 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC29.45■■■□□ 2.31
SNAPC4Q5SXM2 KRT19P2-202ENST00000557173 1012 ntBASIC29.45■■■□□ 2.31
SNAPC4Q5SXM2 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC29.45■■■□□ 2.31
SNAPC4Q5SXM2 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC29.45■■■□□ 2.31
SNAPC4Q5SXM2 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.31
SNAPC4Q5SXM2 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC29.45■■■□□ 2.3
SNAPC4Q5SXM2 AC148477.5-201ENST00000625164 1645 ntBASIC29.45■■■□□ 2.3
SNAPC4Q5SXM2 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC29.45■■■□□ 2.3
SNAPC4Q5SXM2 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC29.45■■■□□ 2.3
SNAPC4Q5SXM2 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC29.44■■■□□ 2.3
SNAPC4Q5SXM2 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
SNAPC4Q5SXM2 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
SNAPC4Q5SXM2 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC29.44■■■□□ 2.3
SNAPC4Q5SXM2 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC29.44■■■□□ 2.3
SNAPC4Q5SXM2 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC29.44■■■□□ 2.3
SNAPC4Q5SXM2 POLD4-207ENST00000531239 584 ntTSL 2 BASIC29.44■■■□□ 2.3
SNAPC4Q5SXM2 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC29.44■■■□□ 2.3
SNAPC4Q5SXM2 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC29.44■■■□□ 2.3
SNAPC4Q5SXM2 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC29.44■■■□□ 2.3
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms