Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.16■□□□□ 0.34
RUNDC3AQ59EK9 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RUNDC3AQ59EK9 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC17.16■□□□□ 0.34
RUNDC3AQ59EK9 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RUNDC3AQ59EK9 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.16■□□□□ 0.34
RUNDC3AQ59EK9 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
RUNDC3AQ59EK9 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.16■□□□□ 0.34
RUNDC3AQ59EK9 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RUNDC3AQ59EK9 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RUNDC3AQ59EK9 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RUNDC3AQ59EK9 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RUNDC3AQ59EK9 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RUNDC3AQ59EK9 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.16■□□□□ 0.34
RUNDC3AQ59EK9 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RUNDC3AQ59EK9 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
RUNDC3AQ59EK9 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RUNDC3AQ59EK9 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RUNDC3AQ59EK9 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RUNDC3AQ59EK9 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RUNDC3AQ59EK9 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.15■□□□□ 0.34
RUNDC3AQ59EK9 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RUNDC3AQ59EK9 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC17.15■□□□□ 0.34
RUNDC3AQ59EK9 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
RUNDC3AQ59EK9 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RUNDC3AQ59EK9 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RUNDC3AQ59EK9 KIRREL3-AS3-201ENST00000404882 831 ntBASIC17.15■□□□□ 0.34
RUNDC3AQ59EK9 CRYGFP-201ENST00000418459 633 ntBASIC17.15■□□□□ 0.34
RUNDC3AQ59EK9 CD99P1-205ENST00000527459 561 ntBASIC17.15■□□□□ 0.34
RUNDC3AQ59EK9 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.15■□□□□ 0.34
RUNDC3AQ59EK9 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.15■□□□□ 0.34
RUNDC3AQ59EK9 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.15■□□□□ 0.34
RUNDC3AQ59EK9 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RUNDC3AQ59EK9 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RUNDC3AQ59EK9 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RUNDC3AQ59EK9 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RUNDC3AQ59EK9 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
RUNDC3AQ59EK9 AC106820.2-201ENST00000563775 3264 ntBASIC17.15■□□□□ 0.34
RUNDC3AQ59EK9 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RUNDC3AQ59EK9 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RUNDC3AQ59EK9 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
RUNDC3AQ59EK9 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RUNDC3AQ59EK9 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RUNDC3AQ59EK9 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RUNDC3AQ59EK9 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RUNDC3AQ59EK9 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RUNDC3AQ59EK9 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.15■□□□□ 0.34
RUNDC3AQ59EK9 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
RUNDC3AQ59EK9 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
RUNDC3AQ59EK9 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.34
RUNDC3AQ59EK9 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
RUNDC3AQ59EK9 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC17.14■□□□□ 0.34
RUNDC3AQ59EK9 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RUNDC3AQ59EK9 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RUNDC3AQ59EK9 AL024508.2-201ENST00000607749 1894 ntBASIC17.14■□□□□ 0.33
RUNDC3AQ59EK9 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.14■□□□□ 0.33
RUNDC3AQ59EK9 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RUNDC3AQ59EK9 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
RUNDC3AQ59EK9 AC009053.2-201ENST00000563701 2365 ntBASIC17.14■□□□□ 0.33
RUNDC3AQ59EK9 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RUNDC3AQ59EK9 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC17.14■□□□□ 0.33
RUNDC3AQ59EK9 AC080080.1-201ENST00000625121 2420 ntBASIC17.14■□□□□ 0.33
RUNDC3AQ59EK9 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RUNDC3AQ59EK9 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.14■□□□□ 0.33
RUNDC3AQ59EK9 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.14■□□□□ 0.33
RUNDC3AQ59EK9 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.14■□□□□ 0.33
RUNDC3AQ59EK9 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC17.14■□□□□ 0.33
RUNDC3AQ59EK9 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC17.14■□□□□ 0.33
RUNDC3AQ59EK9 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.14■□□□□ 0.33
RUNDC3AQ59EK9 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RUNDC3AQ59EK9 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RUNDC3AQ59EK9 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RUNDC3AQ59EK9 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RUNDC3AQ59EK9 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
RUNDC3AQ59EK9 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RUNDC3AQ59EK9 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RUNDC3AQ59EK9 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RUNDC3AQ59EK9 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RUNDC3AQ59EK9 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RUNDC3AQ59EK9 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RUNDC3AQ59EK9 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
RUNDC3AQ59EK9 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
RUNDC3AQ59EK9 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RUNDC3AQ59EK9 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RUNDC3AQ59EK9 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
RUNDC3AQ59EK9 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RUNDC3AQ59EK9 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
RUNDC3AQ59EK9 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
RUNDC3AQ59EK9 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
RUNDC3AQ59EK9 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.13■□□□□ 0.33
RUNDC3AQ59EK9 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.13■□□□□ 0.33
RUNDC3AQ59EK9 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.13■□□□□ 0.33
RUNDC3AQ59EK9 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.13■□□□□ 0.33
RUNDC3AQ59EK9 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.13■□□□□ 0.33
RUNDC3AQ59EK9 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC17.13■□□□□ 0.33
RUNDC3AQ59EK9 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
RUNDC3AQ59EK9 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.13■□□□□ 0.33
RUNDC3AQ59EK9 WWOX-216ENST00000569818 525 ntBASIC17.13■□□□□ 0.33
RUNDC3AQ59EK9 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
RUNDC3AQ59EK9 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC17.13■□□□□ 0.33
RUNDC3AQ59EK9 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms