Protein–RNA interactions for Protein: Q33E94

RFX4, Transcription factor RFX4, humanhuman

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4Q33E94 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RFX4Q33E94 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.91■□□□□ 0.3
RFX4Q33E94 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.91■□□□□ 0.3
RFX4Q33E94 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.91■□□□□ 0.3
RFX4Q33E94 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFX4Q33E94 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.91■□□□□ 0.3
RFX4Q33E94 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RFX4Q33E94 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
RFX4Q33E94 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFX4Q33E94 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFX4Q33E94 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RFX4Q33E94 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFX4Q33E94 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RFX4Q33E94 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RFX4Q33E94 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.91■□□□□ 0.3
RFX4Q33E94 AC091390.4-202ENST00000476426 537 ntBASIC16.91■□□□□ 0.3
RFX4Q33E94 AP002982.1-201ENST00000492365 877 ntBASIC16.91■□□□□ 0.3
RFX4Q33E94 KRT18P6-201ENST00000555540 1265 ntBASIC16.91■□□□□ 0.3
RFX4Q33E94 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.91■□□□□ 0.3
RFX4Q33E94 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC16.91■□□□□ 0.3
RFX4Q33E94 TBCB-214ENST00000629269 413 ntTSL 5 BASIC16.91■□□□□ 0.3
RFX4Q33E94 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFX4Q33E94 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFX4Q33E94 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFX4Q33E94 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFX4Q33E94 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFX4Q33E94 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFX4Q33E94 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFX4Q33E94 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
RFX4Q33E94 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
RFX4Q33E94 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
RFX4Q33E94 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
RFX4Q33E94 RCC2P3-201ENST00000418112 1537 ntBASIC16.91■□□□□ 0.3
RFX4Q33E94 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFX4Q33E94 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
RFX4Q33E94 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RFX4Q33E94 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.9■□□□□ 0.3
RFX4Q33E94 PHGDH-209ENST00000641074 1780 ntBASIC16.9■□□□□ 0.3
RFX4Q33E94 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC16.9■□□□□ 0.3
RFX4Q33E94 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC16.9■□□□□ 0.3
RFX4Q33E94 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RFX4Q33E94 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RFX4Q33E94 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFX4Q33E94 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFX4Q33E94 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFX4Q33E94 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFX4Q33E94 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFX4Q33E94 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC16.9■□□□□ 0.3
RFX4Q33E94 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFX4Q33E94 KSR1P1-201ENST00000446298 240 ntBASIC16.9■□□□□ 0.3
RFX4Q33E94 RPS2P4-201ENST00000476944 856 ntBASIC16.9■□□□□ 0.3
RFX4Q33E94 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16.9■□□□□ 0.3
RFX4Q33E94 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RFX4Q33E94 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.9■□□□□ 0.3
RFX4Q33E94 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.9■□□□□ 0.3
RFX4Q33E94 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC16.9■□□□□ 0.3
RFX4Q33E94 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RFX4Q33E94 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFX4Q33E94 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC16.9■□□□□ 0.3
RFX4Q33E94 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.9■□□□□ 0.3
RFX4Q33E94 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFX4Q33E94 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RFX4Q33E94 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RFX4Q33E94 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RFX4Q33E94 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFX4Q33E94 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
RFX4Q33E94 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
RFX4Q33E94 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RFX4Q33E94 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
RFX4Q33E94 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC16.9■□□□□ 0.3
RFX4Q33E94 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
RFX4Q33E94 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.89■□□□□ 0.3
RFX4Q33E94 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
RFX4Q33E94 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
RFX4Q33E94 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.89■□□□□ 0.3
RFX4Q33E94 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC16.89■□□□□ 0.3
RFX4Q33E94 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
RFX4Q33E94 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFX4Q33E94 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
RFX4Q33E94 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RFX4Q33E94 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFX4Q33E94 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RFX4Q33E94 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFX4Q33E94 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFX4Q33E94 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
RFX4Q33E94 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFX4Q33E94 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFX4Q33E94 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFX4Q33E94 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RFX4Q33E94 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC16.89■□□□□ 0.29
RFX4Q33E94 AC004951.3-201ENST00000418645 1148 ntBASIC16.89■□□□□ 0.29
RFX4Q33E94 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.89■□□□□ 0.29
RFX4Q33E94 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
RFX4Q33E94 CABP2-204ENST00000636477 941 ntTSL 5 BASIC16.89■□□□□ 0.29
RFX4Q33E94 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFX4Q33E94 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
RFX4Q33E94 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
RFX4Q33E94 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
RFX4Q33E94 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC16.89■□□□□ 0.29
RFX4Q33E94 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms