Protein–RNA interactions for Protein: Q02985

CFHR3, Complement factor H-related protein 3, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFHR3Q02985 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
CFHR3Q02985 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC14.16□□□□□ -0.14
CFHR3Q02985 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CFHR3Q02985 CIB2-208ENST00000560618 804 ntTSL 2 BASIC14.16□□□□□ -0.14
CFHR3Q02985 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
CFHR3Q02985 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC14.16□□□□□ -0.14
CFHR3Q02985 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC14.16□□□□□ -0.14
CFHR3Q02985 IGHV3-41-201ENST00000613121 348 ntBASIC14.16□□□□□ -0.14
CFHR3Q02985 AC009154.2-201ENST00000621177 724 ntBASIC14.16□□□□□ -0.14
CFHR3Q02985 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC14.16□□□□□ -0.14
CFHR3Q02985 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CFHR3Q02985 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC14.16□□□□□ -0.14
CFHR3Q02985 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
CFHR3Q02985 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CFHR3Q02985 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CFHR3Q02985 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
CFHR3Q02985 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CFHR3Q02985 AC132938.6-201ENST00000623828 1655 ntBASIC14.16□□□□□ -0.14
CFHR3Q02985 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CFHR3Q02985 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CFHR3Q02985 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CFHR3Q02985 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CFHR3Q02985 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
CFHR3Q02985 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CFHR3Q02985 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
CFHR3Q02985 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC14.16□□□□□ -0.14
CFHR3Q02985 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CFHR3Q02985 KRT18P1-202ENST00000452408 1331 ntBASIC14.15□□□□□ -0.14
CFHR3Q02985 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CFHR3Q02985 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CFHR3Q02985 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CFHR3Q02985 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CFHR3Q02985 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CFHR3Q02985 PKD1P1-201ENST00000458669 6805 ntBASIC14.15□□□□□ -0.14
CFHR3Q02985 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
CFHR3Q02985 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CFHR3Q02985 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
CFHR3Q02985 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CFHR3Q02985 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CFHR3Q02985 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CFHR3Q02985 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CFHR3Q02985 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC14.15□□□□□ -0.14
CFHR3Q02985 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC14.15□□□□□ -0.14
CFHR3Q02985 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CFHR3Q02985 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CFHR3Q02985 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC14.15□□□□□ -0.14
CFHR3Q02985 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.15□□□□□ -0.14
CFHR3Q02985 TSPY12P-201ENST00000421279 868 ntBASIC14.15□□□□□ -0.14
CFHR3Q02985 AL845331.1-201ENST00000424978 1190 ntBASIC14.15□□□□□ -0.14
CFHR3Q02985 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC14.15□□□□□ -0.14
CFHR3Q02985 KRT18P65-201ENST00000439811 1286 ntBASIC14.15□□□□□ -0.14
CFHR3Q02985 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CFHR3Q02985 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC14.15□□□□□ -0.14
CFHR3Q02985 MPI-205ENST00000562606 1052 ntTSL 3 BASIC14.15□□□□□ -0.14
CFHR3Q02985 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
CFHR3Q02985 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC14.15□□□□□ -0.14
CFHR3Q02985 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CFHR3Q02985 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC14.15□□□□□ -0.14
CFHR3Q02985 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
CFHR3Q02985 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC14.15□□□□□ -0.14
CFHR3Q02985 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
CFHR3Q02985 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CFHR3Q02985 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC14.15□□□□□ -0.14
CFHR3Q02985 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
CFHR3Q02985 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC14.15□□□□□ -0.14
CFHR3Q02985 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CFHR3Q02985 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC14.15□□□□□ -0.14
CFHR3Q02985 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CFHR3Q02985 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
CFHR3Q02985 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CFHR3Q02985 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
CFHR3Q02985 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CFHR3Q02985 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
CFHR3Q02985 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
CFHR3Q02985 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC14.14□□□□□ -0.15
CFHR3Q02985 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CFHR3Q02985 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CFHR3Q02985 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CFHR3Q02985 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CFHR3Q02985 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC14.14□□□□□ -0.15
CFHR3Q02985 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CFHR3Q02985 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
CFHR3Q02985 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CFHR3Q02985 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC14.14□□□□□ -0.15
CFHR3Q02985 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CFHR3Q02985 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CFHR3Q02985 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC14.14□□□□□ -0.15
CFHR3Q02985 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CFHR3Q02985 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CFHR3Q02985 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CFHR3Q02985 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
CFHR3Q02985 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.14□□□□□ -0.15
CFHR3Q02985 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.14□□□□□ -0.15
CFHR3Q02985 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC14.14□□□□□ -0.15
CFHR3Q02985 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
CFHR3Q02985 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
CFHR3Q02985 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC14.14□□□□□ -0.15
CFHR3Q02985 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC14.14□□□□□ -0.15
CFHR3Q02985 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
CFHR3Q02985 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms