Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC21.09■□□□□ 0.97
IRX3P78415 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
IRX3P78415 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
IRX3P78415 RCN1P2-201ENST00000398357 915 ntBASIC21.09■□□□□ 0.97
IRX3P78415 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC21.09■□□□□ 0.97
IRX3P78415 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
IRX3P78415 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC21.09■□□□□ 0.97
IRX3P78415 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
IRX3P78415 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC21.09■□□□□ 0.97
IRX3P78415 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC21.09■□□□□ 0.97
IRX3P78415 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
IRX3P78415 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
IRX3P78415 UROS-202ENST00000368778 1556 ntTSL 2 BASIC21.09■□□□□ 0.97
IRX3P78415 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
IRX3P78415 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
IRX3P78415 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC21.09■□□□□ 0.97
IRX3P78415 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC21.09■□□□□ 0.97
IRX3P78415 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
IRX3P78415 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
IRX3P78415 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
IRX3P78415 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC21.09■□□□□ 0.97
IRX3P78415 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
IRX3P78415 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
IRX3P78415 AC138932.1-201ENST00000534164 6830 ntBASIC21.08■□□□□ 0.97
IRX3P78415 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
IRX3P78415 AC099343.3-201ENST00000605834 2503 ntBASIC21.08■□□□□ 0.97
IRX3P78415 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC21.08■□□□□ 0.97
IRX3P78415 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC21.08■□□□□ 0.97
IRX3P78415 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC21.08■□□□□ 0.97
IRX3P78415 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
IRX3P78415 CCS-201ENST00000310190 942 ntTSL 5 BASIC21.08■□□□□ 0.97
IRX3P78415 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC21.08■□□□□ 0.97
IRX3P78415 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC21.08■□□□□ 0.97
IRX3P78415 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
IRX3P78415 RPP21-221ENST00000428040 594 ntTSL 2 BASIC21.08■□□□□ 0.97
IRX3P78415 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
IRX3P78415 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
IRX3P78415 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC21.08■□□□□ 0.97
IRX3P78415 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC21.08■□□□□ 0.97
IRX3P78415 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC21.08■□□□□ 0.97
IRX3P78415 COX5A-204ENST00000567270 579 ntTSL 3 BASIC21.08■□□□□ 0.97
IRX3P78415 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC21.08■□□□□ 0.97
IRX3P78415 AC083906.6-201ENST00000641366 219 ntBASIC21.08■□□□□ 0.97
IRX3P78415 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
IRX3P78415 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
IRX3P78415 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
IRX3P78415 TP73-AS1-210ENST00000637775 1455 ntBASIC21.07■□□□□ 0.96
IRX3P78415 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
IRX3P78415 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
IRX3P78415 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
IRX3P78415 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC21.07■□□□□ 0.96
IRX3P78415 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
IRX3P78415 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC21.07■□□□□ 0.96
IRX3P78415 HIST2H3DP1-201ENST00000401004 416 ntBASIC21.07■□□□□ 0.96
IRX3P78415 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC21.07■□□□□ 0.96
IRX3P78415 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC21.07■□□□□ 0.96
IRX3P78415 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC21.07■□□□□ 0.96
IRX3P78415 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
IRX3P78415 AC005336.2-201ENST00000593183 939 ntBASIC21.07■□□□□ 0.96
IRX3P78415 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
IRX3P78415 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
IRX3P78415 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC21.07■□□□□ 0.96
IRX3P78415 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
IRX3P78415 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
IRX3P78415 AC093484.2-201ENST00000580996 2166 ntBASIC21.07■□□□□ 0.96
IRX3P78415 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
IRX3P78415 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
IRX3P78415 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC21.07■□□□□ 0.96
IRX3P78415 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
IRX3P78415 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
IRX3P78415 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
IRX3P78415 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
IRX3P78415 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC21.06■□□□□ 0.96
IRX3P78415 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
IRX3P78415 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
IRX3P78415 AC112777.1-201ENST00000540175 1423 ntBASIC21.06■□□□□ 0.96
IRX3P78415 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
IRX3P78415 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
IRX3P78415 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC21.06■□□□□ 0.96
IRX3P78415 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
IRX3P78415 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC21.06■□□□□ 0.96
IRX3P78415 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC21.06■□□□□ 0.96
IRX3P78415 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
IRX3P78415 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
IRX3P78415 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
IRX3P78415 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
IRX3P78415 KRT18P13-201ENST00000400056 1290 ntBASIC21.06■□□□□ 0.96
IRX3P78415 AC073648.2-201ENST00000510116 352 ntBASIC21.06■□□□□ 0.96
IRX3P78415 KRT18P58-201ENST00000527480 1120 ntBASIC21.06■□□□□ 0.96
IRX3P78415 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC21.06■□□□□ 0.96
IRX3P78415 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC21.06■□□□□ 0.96
IRX3P78415 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC21.06■□□□□ 0.96
IRX3P78415 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
IRX3P78415 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
IRX3P78415 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
IRX3P78415 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC21.06■□□□□ 0.96
IRX3P78415 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
IRX3P78415 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
IRX3P78415 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
IRX3P78415 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC21.06■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms