Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
IRX4P78413 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
IRX4P78413 LTB4R2-202ENST00000528054 3092 ntBASIC18.89■□□□□ 0.62
IRX4P78413 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.89■□□□□ 0.62
IRX4P78413 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
IRX4P78413 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
IRX4P78413 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.89■□□□□ 0.61
IRX4P78413 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.89■□□□□ 0.61
IRX4P78413 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
IRX4P78413 PKD1P1-201ENST00000458669 6805 ntBASIC18.89■□□□□ 0.61
IRX4P78413 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
IRX4P78413 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
IRX4P78413 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
IRX4P78413 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
IRX4P78413 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
IRX4P78413 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
IRX4P78413 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC18.89■□□□□ 0.61
IRX4P78413 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC18.89■□□□□ 0.61
IRX4P78413 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC18.89■□□□□ 0.61
IRX4P78413 AL845331.1-201ENST00000424978 1190 ntBASIC18.89■□□□□ 0.61
IRX4P78413 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.89■□□□□ 0.61
IRX4P78413 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
IRX4P78413 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.89■□□□□ 0.61
IRX4P78413 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
IRX4P78413 BICD1-207ENST00000551848 1962 ntBASIC18.89■□□□□ 0.61
IRX4P78413 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
IRX4P78413 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC18.89■□□□□ 0.61
IRX4P78413 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC18.89■□□□□ 0.61
IRX4P78413 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
IRX4P78413 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.89■□□□□ 0.61
IRX4P78413 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC18.89■□□□□ 0.61
IRX4P78413 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC18.89■□□□□ 0.61
IRX4P78413 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.89■□□□□ 0.61
IRX4P78413 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
IRX4P78413 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
IRX4P78413 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC18.89■□□□□ 0.61
IRX4P78413 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
IRX4P78413 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
IRX4P78413 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
IRX4P78413 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.88■□□□□ 0.61
IRX4P78413 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.88■□□□□ 0.61
IRX4P78413 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC18.88■□□□□ 0.61
IRX4P78413 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
IRX4P78413 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
IRX4P78413 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
IRX4P78413 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
IRX4P78413 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IRX4P78413 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IRX4P78413 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
IRX4P78413 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IRX4P78413 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
IRX4P78413 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
IRX4P78413 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IRX4P78413 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC18.88■□□□□ 0.61
IRX4P78413 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.88■□□□□ 0.61
IRX4P78413 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC18.88■□□□□ 0.61
IRX4P78413 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC18.88■□□□□ 0.61
IRX4P78413 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IRX4P78413 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
IRX4P78413 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IRX4P78413 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IRX4P78413 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IRX4P78413 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
IRX4P78413 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.88■□□□□ 0.61
IRX4P78413 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.88■□□□□ 0.61
IRX4P78413 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IRX4P78413 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IRX4P78413 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.88■□□□□ 0.61
IRX4P78413 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IRX4P78413 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
IRX4P78413 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
IRX4P78413 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
IRX4P78413 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.88■□□□□ 0.61
IRX4P78413 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
IRX4P78413 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC18.88■□□□□ 0.61
IRX4P78413 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC18.88■□□□□ 0.61
IRX4P78413 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
IRX4P78413 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.87■□□□□ 0.61
IRX4P78413 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.87■□□□□ 0.61
IRX4P78413 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.87■□□□□ 0.61
IRX4P78413 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
IRX4P78413 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
IRX4P78413 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
IRX4P78413 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
IRX4P78413 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
IRX4P78413 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
IRX4P78413 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
IRX4P78413 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.87■□□□□ 0.61
IRX4P78413 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
IRX4P78413 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
IRX4P78413 AL354751.1-201ENST00000412768 1863 ntBASIC18.87■□□□□ 0.61
IRX4P78413 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC18.87■□□□□ 0.61
IRX4P78413 PVRIG2P-201ENST00000435460 978 ntBASIC18.87■□□□□ 0.61
IRX4P78413 AP000347.1-202ENST00000435868 847 ntBASIC18.87■□□□□ 0.61
IRX4P78413 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC18.87■□□□□ 0.61
IRX4P78413 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.87■□□□□ 0.61
IRX4P78413 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
IRX4P78413 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
IRX4P78413 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC18.87■□□□□ 0.61
IRX4P78413 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms