Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
YBX1P67809 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.71■□□□□ 0.43
YBX1P67809 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
YBX1P67809 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
YBX1P67809 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
YBX1P67809 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
YBX1P67809 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.71■□□□□ 0.43
YBX1P67809 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC17.71■□□□□ 0.43
YBX1P67809 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.71■□□□□ 0.43
YBX1P67809 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
YBX1P67809 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
YBX1P67809 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
YBX1P67809 SPDYE13P-201ENST00000445314 798 ntBASIC17.71■□□□□ 0.43
YBX1P67809 HOMER2P1-201ENST00000455653 964 ntBASIC17.71■□□□□ 0.43
YBX1P67809 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
YBX1P67809 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.71■□□□□ 0.43
YBX1P67809 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.71■□□□□ 0.43
YBX1P67809 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.71■□□□□ 0.43
YBX1P67809 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
YBX1P67809 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
YBX1P67809 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
YBX1P67809 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
YBX1P67809 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.71■□□□□ 0.42
YBX1P67809 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.71■□□□□ 0.42
YBX1P67809 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.42
YBX1P67809 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC17.7■□□□□ 0.42
YBX1P67809 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
YBX1P67809 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.7■□□□□ 0.42
YBX1P67809 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.7■□□□□ 0.42
YBX1P67809 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
YBX1P67809 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
YBX1P67809 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
YBX1P67809 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
YBX1P67809 AL031133.1-201ENST00000406807 723 ntBASIC17.7■□□□□ 0.42
YBX1P67809 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.7■□□□□ 0.42
YBX1P67809 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.7■□□□□ 0.42
YBX1P67809 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.7■□□□□ 0.42
YBX1P67809 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.7■□□□□ 0.42
YBX1P67809 AC083849.1-201ENST00000615227 514 ntBASIC17.7■□□□□ 0.42
YBX1P67809 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
YBX1P67809 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.7■□□□□ 0.42
YBX1P67809 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
YBX1P67809 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
YBX1P67809 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
YBX1P67809 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.7■□□□□ 0.42
YBX1P67809 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
YBX1P67809 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
YBX1P67809 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.7■□□□□ 0.42
YBX1P67809 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
YBX1P67809 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
YBX1P67809 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
YBX1P67809 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
YBX1P67809 AC009102.3-201ENST00000623118 1491 ntBASIC17.69■□□□□ 0.42
YBX1P67809 AL391807.1-203ENST00000604392 2365 ntBASIC17.69■□□□□ 0.42
YBX1P67809 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.69■□□□□ 0.42
YBX1P67809 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
YBX1P67809 LINC01126-201ENST00000623515 1646 ntBASIC17.69■□□□□ 0.42
YBX1P67809 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
YBX1P67809 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
YBX1P67809 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.69■□□□□ 0.42
YBX1P67809 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
YBX1P67809 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
YBX1P67809 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
YBX1P67809 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
YBX1P67809 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
YBX1P67809 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
YBX1P67809 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
YBX1P67809 VENTXP5-201ENST00000523979 775 ntBASIC17.69■□□□□ 0.42
YBX1P67809 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC17.69■□□□□ 0.42
YBX1P67809 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
YBX1P67809 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
YBX1P67809 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
YBX1P67809 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
YBX1P67809 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
YBX1P67809 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
YBX1P67809 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
YBX1P67809 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.69■□□□□ 0.42
YBX1P67809 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
YBX1P67809 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
YBX1P67809 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
YBX1P67809 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
YBX1P67809 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
YBX1P67809 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
YBX1P67809 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
YBX1P67809 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
YBX1P67809 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
YBX1P67809 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.68■□□□□ 0.42
YBX1P67809 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC17.68■□□□□ 0.42
YBX1P67809 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.68■□□□□ 0.42
YBX1P67809 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
YBX1P67809 REXO1L9P-201ENST00000604264 2108 ntBASIC17.68■□□□□ 0.42
YBX1P67809 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.68■□□□□ 0.42
YBX1P67809 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
YBX1P67809 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC17.68■□□□□ 0.42
YBX1P67809 HBZP1-201ENST00000354915 429 ntBASIC17.68■□□□□ 0.42
YBX1P67809 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
YBX1P67809 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
YBX1P67809 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
YBX1P67809 MIR149-201ENST00000384879 89 ntBASIC17.68■□□□□ 0.42
YBX1P67809 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms