Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UBA52P62987 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC15.69■□□□□ 0.1
UBA52P62987 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
UBA52P62987 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
UBA52P62987 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
UBA52P62987 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBA52P62987 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UBA52P62987 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC15.69■□□□□ 0.1
UBA52P62987 AC116351.2-201ENST00000606540 1585 ntBASIC15.69■□□□□ 0.1
UBA52P62987 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
UBA52P62987 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBA52P62987 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBA52P62987 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
UBA52P62987 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
UBA52P62987 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC15.69■□□□□ 0.1
UBA52P62987 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.69■□□□□ 0.1
UBA52P62987 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC15.68■□□□□ 0.1
UBA52P62987 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC15.68■□□□□ 0.1
UBA52P62987 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
UBA52P62987 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC15.68■□□□□ 0.1
UBA52P62987 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC15.68■□□□□ 0.1
UBA52P62987 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBA52P62987 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBA52P62987 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBA52P62987 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UBA52P62987 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBA52P62987 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
UBA52P62987 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UBA52P62987 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBA52P62987 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC15.68■□□□□ 0.1
UBA52P62987 PRR31-201ENST00000371629 978 ntTSL 2 BASIC15.68■□□□□ 0.1
UBA52P62987 TUBB8P6-201ENST00000436895 1288 ntBASIC15.68■□□□□ 0.1
UBA52P62987 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC15.68■□□□□ 0.1
UBA52P62987 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UBA52P62987 KRT18P16-201ENST00000510337 1294 ntBASIC15.68■□□□□ 0.1
UBA52P62987 LINC01238-205ENST00000567549 1107 ntBASIC15.68■□□□□ 0.1
UBA52P62987 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
UBA52P62987 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBA52P62987 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
UBA52P62987 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UBA52P62987 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBA52P62987 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC15.68■□□□□ 0.1
UBA52P62987 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBA52P62987 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
UBA52P62987 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC15.68■□□□□ 0.1
UBA52P62987 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC15.68■□□□□ 0.1
UBA52P62987 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBA52P62987 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
UBA52P62987 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBA52P62987 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.68■□□□□ 0.1
UBA52P62987 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBA52P62987 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBA52P62987 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
UBA52P62987 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC15.67■□□□□ 0.1
UBA52P62987 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC15.67■□□□□ 0.1
UBA52P62987 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBA52P62987 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBA52P62987 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC15.67■□□□□ 0.1
UBA52P62987 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC15.67■□□□□ 0.1
UBA52P62987 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC15.67■□□□□ 0.1
UBA52P62987 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
UBA52P62987 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC15.67■□□□□ 0.1
UBA52P62987 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBA52P62987 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBA52P62987 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBA52P62987 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBA52P62987 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBA52P62987 LTF-203ENST00000426532 2494 ntTSL 2 BASIC15.67■□□□□ 0.1
UBA52P62987 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBA52P62987 PXK-206ENST00000463280 2825 ntTSL 2 BASIC15.67■□□□□ 0.1
UBA52P62987 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
UBA52P62987 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBA52P62987 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBA52P62987 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
UBA52P62987 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
UBA52P62987 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.67■□□□□ 0.1
UBA52P62987 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC15.67■□□□□ 0.1
UBA52P62987 AK4P3-201ENST00000418260 669 ntBASIC15.67■□□□□ 0.1
UBA52P62987 BX664615.1-201ENST00000443558 458 ntBASIC15.67■□□□□ 0.1
UBA52P62987 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC15.67■□□□□ 0.1
UBA52P62987 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC15.67■□□□□ 0.1
UBA52P62987 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
UBA52P62987 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC15.67■□□□□ 0.1
UBA52P62987 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC15.67■□□□□ 0.1
UBA52P62987 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBA52P62987 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
UBA52P62987 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC15.67■□□□□ 0.1
UBA52P62987 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.67■□□□□ 0.1
UBA52P62987 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
UBA52P62987 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
UBA52P62987 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC15.67■□□□□ 0.1
UBA52P62987 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBA52P62987 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBA52P62987 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
UBA52P62987 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
UBA52P62987 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBA52P62987 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBA52P62987 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
UBA52P62987 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
UBA52P62987 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms