Protein–RNA interactions for Protein: P62701

RPS4X, 40S ribosomal protein S4, X isoform, humanhuman

Known RBP Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS4XP62701 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.41■□□□□ 0.22
RPS4XP62701 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.41■□□□□ 0.22
RPS4XP62701 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RPS4XP62701 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
RPS4XP62701 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RPS4XP62701 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC16.41■□□□□ 0.22
RPS4XP62701 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
RPS4XP62701 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
RPS4XP62701 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
RPS4XP62701 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
RPS4XP62701 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.41■□□□□ 0.22
RPS4XP62701 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RPS4XP62701 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RPS4XP62701 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RPS4XP62701 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC16.41■□□□□ 0.22
RPS4XP62701 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.41■□□□□ 0.22
RPS4XP62701 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
RPS4XP62701 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.4■□□□□ 0.22
RPS4XP62701 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPS4XP62701 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPS4XP62701 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.4■□□□□ 0.22
RPS4XP62701 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPS4XP62701 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPS4XP62701 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RPS4XP62701 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPS4XP62701 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPS4XP62701 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPS4XP62701 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.4■□□□□ 0.22
RPS4XP62701 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC16.4■□□□□ 0.22
RPS4XP62701 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.4■□□□□ 0.22
RPS4XP62701 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RPS4XP62701 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC16.4■□□□□ 0.22
RPS4XP62701 AL358472.4-201ENST00000633140 710 ntBASIC16.4■□□□□ 0.22
RPS4XP62701 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC16.4■□□□□ 0.22
RPS4XP62701 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
RPS4XP62701 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPS4XP62701 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
RPS4XP62701 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPS4XP62701 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC16.4■□□□□ 0.22
RPS4XP62701 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC16.4■□□□□ 0.22
RPS4XP62701 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
RPS4XP62701 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPS4XP62701 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPS4XP62701 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC16.4■□□□□ 0.22
RPS4XP62701 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
RPS4XP62701 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
RPS4XP62701 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
RPS4XP62701 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
RPS4XP62701 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.22
RPS4XP62701 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.22
RPS4XP62701 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RPS4XP62701 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RPS4XP62701 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RPS4XP62701 LINC00896-202ENST00000609602 2128 ntBASIC16.39■□□□□ 0.21
RPS4XP62701 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.39■□□□□ 0.21
RPS4XP62701 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RPS4XP62701 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RPS4XP62701 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RPS4XP62701 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.39■□□□□ 0.21
RPS4XP62701 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
RPS4XP62701 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
RPS4XP62701 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.39■□□□□ 0.21
RPS4XP62701 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC16.39■□□□□ 0.21
RPS4XP62701 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC16.39■□□□□ 0.21
RPS4XP62701 NEK4P2-201ENST00000580004 1012 ntBASIC16.39■□□□□ 0.21
RPS4XP62701 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.39■□□□□ 0.21
RPS4XP62701 AC140113.3-201ENST00000605663 199 ntBASIC16.39■□□□□ 0.21
RPS4XP62701 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
RPS4XP62701 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RPS4XP62701 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RPS4XP62701 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC16.39■□□□□ 0.21
RPS4XP62701 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RPS4XP62701 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
RPS4XP62701 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.39■□□□□ 0.21
RPS4XP62701 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RPS4XP62701 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RPS4XP62701 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
RPS4XP62701 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.39■□□□□ 0.21
RPS4XP62701 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RPS4XP62701 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
RPS4XP62701 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RPS4XP62701 KRT18P55-202ENST00000578578 1546 ntBASIC16.39■□□□□ 0.21
RPS4XP62701 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RPS4XP62701 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC16.39■□□□□ 0.21
RPS4XP62701 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RPS4XP62701 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
RPS4XP62701 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
RPS4XP62701 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
RPS4XP62701 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RPS4XP62701 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
RPS4XP62701 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.38■□□□□ 0.21
RPS4XP62701 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RPS4XP62701 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RPS4XP62701 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RPS4XP62701 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
RPS4XP62701 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RPS4XP62701 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
RPS4XP62701 AC009947.2-201ENST00000444014 672 ntBASIC16.38■□□□□ 0.21
RPS4XP62701 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
RPS4XP62701 HOMER2P1-201ENST00000455653 964 ntBASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms