Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.89■□□□□ 0.45
SRP54P61011 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.89■□□□□ 0.45
SRP54P61011 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SRP54P61011 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SRP54P61011 AC004870.1-201ENST00000315132 882 ntBASIC17.89■□□□□ 0.45
SRP54P61011 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SRP54P61011 TSPY12P-201ENST00000421279 868 ntBASIC17.89■□□□□ 0.45
SRP54P61011 AL845331.1-201ENST00000424978 1190 ntBASIC17.89■□□□□ 0.45
SRP54P61011 IGHV3-47-201ENST00000425060 335 ntBASIC17.89■□□□□ 0.45
SRP54P61011 AC246785.2-201ENST00000432512 513 ntBASIC17.89■□□□□ 0.45
SRP54P61011 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.89■□□□□ 0.45
SRP54P61011 KRT18P31-201ENST00000506277 1292 ntBASIC17.89■□□□□ 0.45
SRP54P61011 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SRP54P61011 LINC01711-201ENST00000598340 967 ntBASIC17.89■□□□□ 0.45
SRP54P61011 AC138894.3-201ENST00000603787 634 ntBASIC17.89■□□□□ 0.45
SRP54P61011 IFNL4P1-201ENST00000607083 540 ntBASIC17.89■□□□□ 0.45
SRP54P61011 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SRP54P61011 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.89■□□□□ 0.45
SRP54P61011 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.89■□□□□ 0.45
SRP54P61011 ANKRD20A8P-203ENST00000641373 517 ntBASIC17.89■□□□□ 0.45
SRP54P61011 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
SRP54P61011 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.89■□□□□ 0.45
SRP54P61011 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SRP54P61011 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SRP54P61011 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.45
SRP54P61011 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
SRP54P61011 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SRP54P61011 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.89■□□□□ 0.45
SRP54P61011 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SRP54P61011 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
SRP54P61011 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRP54P61011 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRP54P61011 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRP54P61011 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRP54P61011 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRP54P61011 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRP54P61011 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRP54P61011 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRP54P61011 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
SRP54P61011 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC17.88■□□□□ 0.45
SRP54P61011 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC17.88■□□□□ 0.45
SRP54P61011 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC17.88■□□□□ 0.45
SRP54P61011 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC17.88■□□□□ 0.45
SRP54P61011 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRP54P61011 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.88■□□□□ 0.45
SRP54P61011 AP005901.3-202ENST00000581653 237 ntBASIC17.88■□□□□ 0.45
SRP54P61011 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC17.88■□□□□ 0.45
SRP54P61011 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
SRP54P61011 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRP54P61011 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRP54P61011 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC17.88■□□□□ 0.45
SRP54P61011 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRP54P61011 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRP54P61011 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRP54P61011 NSUN5P1-202ENST00000421140 1535 ntBASIC17.88■□□□□ 0.45
SRP54P61011 NSUN5P2-203ENST00000457352 1529 ntBASIC17.88■□□□□ 0.45
SRP54P61011 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC17.88■□□□□ 0.45
SRP54P61011 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.87■□□□□ 0.45
SRP54P61011 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SRP54P61011 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SRP54P61011 AC005082.1-201ENST00000413042 2259 ntBASIC17.87■□□□□ 0.45
SRP54P61011 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SRP54P61011 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SRP54P61011 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SRP54P61011 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SRP54P61011 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SRP54P61011 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.87■□□□□ 0.45
SRP54P61011 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SRP54P61011 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC17.87■□□□□ 0.45
SRP54P61011 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.87■□□□□ 0.45
SRP54P61011 AC091607.1-201ENST00000490318 1060 ntBASIC17.87■□□□□ 0.45
SRP54P61011 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.87■□□□□ 0.45
SRP54P61011 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC17.87■□□□□ 0.45
SRP54P61011 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC17.87■□□□□ 0.45
SRP54P61011 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
SRP54P61011 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SRP54P61011 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC17.87■□□□□ 0.45
SRP54P61011 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SRP54P61011 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SRP54P61011 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.87■□□□□ 0.45
SRP54P61011 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.87■□□□□ 0.45
SRP54P61011 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC17.87■□□□□ 0.45
SRP54P61011 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SRP54P61011 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
SRP54P61011 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRP54P61011 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SRP54P61011 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRP54P61011 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRP54P61011 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SRP54P61011 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SRP54P61011 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
SRP54P61011 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.86■□□□□ 0.45
SRP54P61011 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC17.86■□□□□ 0.45
SRP54P61011 FAAHP1-202ENST00000446499 1238 ntBASIC17.86■□□□□ 0.45
SRP54P61011 MINOS1P3-201ENST00000457048 203 ntBASIC17.86■□□□□ 0.45
SRP54P61011 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
SRP54P61011 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.86■□□□□ 0.45
SRP54P61011 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC17.86■□□□□ 0.45
SRP54P61011 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.86■□□□□ 0.45
SRP54P61011 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms