Protein–RNA interactions for Protein: P56696

KCNQ4, Potassium voltage-gated channel subfamily KQT member 4, humanhuman

Predictions only

Length 695 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNQ4P56696 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
KCNQ4P56696 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
KCNQ4P56696 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC23.04■■□□□ 1.28
KCNQ4P56696 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
KCNQ4P56696 KRT18P65-201ENST00000439811 1286 ntBASIC23.04■■□□□ 1.28
KCNQ4P56696 ZIC4-214ENST00000491672 925 ntTSL 4 BASIC23.04■■□□□ 1.28
KCNQ4P56696 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC23.04■■□□□ 1.28
KCNQ4P56696 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
KCNQ4P56696 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC23.04■■□□□ 1.28
KCNQ4P56696 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC23.04■■□□□ 1.28
KCNQ4P56696 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
KCNQ4P56696 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
KCNQ4P56696 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
KCNQ4P56696 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
KCNQ4P56696 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC23.04■■□□□ 1.28
KCNQ4P56696 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC23.04■■□□□ 1.28
KCNQ4P56696 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
KCNQ4P56696 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
KCNQ4P56696 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
KCNQ4P56696 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC23.04■■□□□ 1.28
KCNQ4P56696 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC23.03■■□□□ 1.28
KCNQ4P56696 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
KCNQ4P56696 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC23.03■■□□□ 1.28
KCNQ4P56696 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
KCNQ4P56696 AL161938.1-201ENST00000569833 2180 ntBASIC23.03■■□□□ 1.28
KCNQ4P56696 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC23.03■■□□□ 1.28
KCNQ4P56696 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC23.03■■□□□ 1.28
KCNQ4P56696 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
KCNQ4P56696 PKD1P6-201ENST00000343738 4769 ntBASIC23.03■■□□□ 1.28
KCNQ4P56696 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
KCNQ4P56696 AC254562.1-201ENST00000417586 456 ntBASIC23.03■■□□□ 1.28
KCNQ4P56696 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC23.03■■□□□ 1.28
KCNQ4P56696 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
KCNQ4P56696 AP002472.1-201ENST00000577490 586 ntBASIC23.03■■□□□ 1.28
KCNQ4P56696 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC23.03■■□□□ 1.28
KCNQ4P56696 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC23.03■■□□□ 1.28
KCNQ4P56696 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC23.03■■□□□ 1.28
KCNQ4P56696 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
KCNQ4P56696 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC23.03■■□□□ 1.28
KCNQ4P56696 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC23.03■■□□□ 1.28
KCNQ4P56696 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC23.03■■□□□ 1.28
KCNQ4P56696 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
KCNQ4P56696 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC23.03■■□□□ 1.28
KCNQ4P56696 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC23.03■■□□□ 1.28
KCNQ4P56696 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC23.03■■□□□ 1.28
KCNQ4P56696 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
KCNQ4P56696 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
KCNQ4P56696 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC23.02■■□□□ 1.28
KCNQ4P56696 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
KCNQ4P56696 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
KCNQ4P56696 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC23.02■■□□□ 1.28
KCNQ4P56696 PMPCAP1-201ENST00000508114 1576 ntBASIC23.02■■□□□ 1.28
KCNQ4P56696 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
KCNQ4P56696 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
KCNQ4P56696 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
KCNQ4P56696 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
KCNQ4P56696 AC093484.2-201ENST00000580996 2166 ntBASIC23.02■■□□□ 1.28
KCNQ4P56696 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
KCNQ4P56696 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
KCNQ4P56696 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
KCNQ4P56696 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC23.02■■□□□ 1.28
KCNQ4P56696 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC23.02■■□□□ 1.28
KCNQ4P56696 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC23.02■■□□□ 1.28
KCNQ4P56696 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
KCNQ4P56696 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
KCNQ4P56696 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
KCNQ4P56696 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC23.02■■□□□ 1.28
KCNQ4P56696 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
KCNQ4P56696 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
KCNQ4P56696 ORC5-208ENST00000626700 344 ntTSL 3 BASIC23.02■■□□□ 1.28
KCNQ4P56696 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC23.02■■□□□ 1.28
KCNQ4P56696 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC23.02■■□□□ 1.28
KCNQ4P56696 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
KCNQ4P56696 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
KCNQ4P56696 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC23.01■■□□□ 1.27
KCNQ4P56696 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
KCNQ4P56696 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
KCNQ4P56696 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
KCNQ4P56696 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
KCNQ4P56696 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
KCNQ4P56696 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC23.01■■□□□ 1.27
KCNQ4P56696 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
KCNQ4P56696 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC23.01■■□□□ 1.27
KCNQ4P56696 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
KCNQ4P56696 MIR770-201ENST00000390219 98 ntBASIC23.01■■□□□ 1.27
KCNQ4P56696 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
KCNQ4P56696 SYS1-203ENST00000414310 795 ntTSL 3 BASIC23.01■■□□□ 1.27
KCNQ4P56696 SLC4A1APP2-201ENST00000424054 1259 ntBASIC23.01■■□□□ 1.27
KCNQ4P56696 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC23.01■■□□□ 1.27
KCNQ4P56696 AC136632.2-201ENST00000512891 861 ntBASIC23.01■■□□□ 1.27
KCNQ4P56696 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
KCNQ4P56696 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC23.01■■□□□ 1.27
KCNQ4P56696 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
KCNQ4P56696 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
KCNQ4P56696 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
KCNQ4P56696 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
KCNQ4P56696 AFG3L1P-217ENST00000557444 2447 ntBASIC23.01■■□□□ 1.27
KCNQ4P56696 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
KCNQ4P56696 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
KCNQ4P56696 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms