Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
PER3P56645 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.8■□□□□ 0.28
PER3P56645 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.8■□□□□ 0.28
PER3P56645 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.8■□□□□ 0.28
PER3P56645 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.8■□□□□ 0.28
PER3P56645 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC16.8■□□□□ 0.28
PER3P56645 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PER3P56645 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC16.8■□□□□ 0.28
PER3P56645 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.8■□□□□ 0.28
PER3P56645 AL662844.1-201ENST00000546340 181 ntBASIC16.8■□□□□ 0.28
PER3P56645 AL160237.2-201ENST00000556165 472 ntBASIC16.8■□□□□ 0.28
PER3P56645 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PER3P56645 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.8■□□□□ 0.28
PER3P56645 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PER3P56645 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PER3P56645 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC16.8■□□□□ 0.28
PER3P56645 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
PER3P56645 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PER3P56645 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
PER3P56645 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PER3P56645 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
PER3P56645 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.8■□□□□ 0.28
PER3P56645 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
PER3P56645 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.8■□□□□ 0.28
PER3P56645 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
PER3P56645 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PER3P56645 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PER3P56645 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
PER3P56645 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
PER3P56645 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PER3P56645 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PER3P56645 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC16.79■□□□□ 0.28
PER3P56645 SYNGAP1-202ENST00000418600 5828 ntTSL 5 BASIC16.79■□□□□ 0.28
PER3P56645 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
PER3P56645 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.79■□□□□ 0.28
PER3P56645 AC068880.1-201ENST00000507289 2297 ntBASIC16.79■□□□□ 0.28
PER3P56645 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PER3P56645 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PER3P56645 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PER3P56645 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PER3P56645 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PER3P56645 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC16.79■□□□□ 0.28
PER3P56645 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC16.79■□□□□ 0.28
PER3P56645 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.79■□□□□ 0.28
PER3P56645 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.79■□□□□ 0.28
PER3P56645 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PER3P56645 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PER3P56645 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PER3P56645 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC16.79■□□□□ 0.28
PER3P56645 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.79■□□□□ 0.28
PER3P56645 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
PER3P56645 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PER3P56645 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
PER3P56645 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PER3P56645 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PER3P56645 AC099398.1-201ENST00000567919 2776 ntBASIC16.79■□□□□ 0.28
PER3P56645 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PER3P56645 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
PER3P56645 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC16.79■□□□□ 0.28
PER3P56645 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC16.79■□□□□ 0.28
PER3P56645 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.79■□□□□ 0.28
PER3P56645 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PER3P56645 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
PER3P56645 TREX1-205ENST00000625293 1783 ntBASIC16.79■□□□□ 0.28
PER3P56645 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
PER3P56645 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PER3P56645 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.79■□□□□ 0.28
PER3P56645 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
PER3P56645 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PER3P56645 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PER3P56645 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
PER3P56645 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PER3P56645 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.78■□□□□ 0.28
PER3P56645 PRORSD1P-202ENST00000563365 2154 ntBASIC16.78■□□□□ 0.28
PER3P56645 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PER3P56645 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PER3P56645 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PER3P56645 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PER3P56645 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
PER3P56645 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
PER3P56645 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PER3P56645 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PER3P56645 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PER3P56645 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PER3P56645 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PER3P56645 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PER3P56645 TSPY19P-201ENST00000418461 509 ntBASIC16.78■□□□□ 0.28
PER3P56645 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
PER3P56645 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PER3P56645 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PER3P56645 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PER3P56645 TSPY18P-201ENST00000441642 509 ntBASIC16.78■□□□□ 0.28
PER3P56645 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.78■□□□□ 0.28
PER3P56645 AP002383.4-201ENST00000442518 975 ntBASIC16.78■□□□□ 0.28
PER3P56645 MCCD1P1-208ENST00000445732 328 ntBASIC16.78■□□□□ 0.28
PER3P56645 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PER3P56645 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
PER3P56645 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
PER3P56645 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
PER3P56645 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC16.78■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms