Protein–RNA interactions for Protein: P55273

CDKN2D, Cyclin-dependent kinase 4 inhibitor D, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2DP55273 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.95■□□□□ 0.46
CDKN2DP55273 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC17.95■□□□□ 0.46
CDKN2DP55273 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
CDKN2DP55273 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDKN2DP55273 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CDKN2DP55273 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.95■□□□□ 0.46
CDKN2DP55273 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDKN2DP55273 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CDKN2DP55273 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CDKN2DP55273 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDKN2DP55273 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CDKN2DP55273 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CDKN2DP55273 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CDKN2DP55273 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.94■□□□□ 0.46
CDKN2DP55273 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDKN2DP55273 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CDKN2DP55273 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDKN2DP55273 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDKN2DP55273 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CDKN2DP55273 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDKN2DP55273 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC17.94■□□□□ 0.46
CDKN2DP55273 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDKN2DP55273 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDKN2DP55273 AP000523.1-201ENST00000398242 1049 ntBASIC17.94■□□□□ 0.46
CDKN2DP55273 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.94■□□□□ 0.46
CDKN2DP55273 PVRIG2P-201ENST00000435460 978 ntBASIC17.94■□□□□ 0.46
CDKN2DP55273 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC17.94■□□□□ 0.46
CDKN2DP55273 CD81-212ENST00000526072 1172 ntTSL 5 BASIC17.94■□□□□ 0.46
CDKN2DP55273 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.94■□□□□ 0.46
CDKN2DP55273 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CDKN2DP55273 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDKN2DP55273 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.94■□□□□ 0.46
CDKN2DP55273 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDKN2DP55273 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDKN2DP55273 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDKN2DP55273 AC006116.8-202ENST00000587620 1550 ntBASIC17.94■□□□□ 0.46
CDKN2DP55273 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CDKN2DP55273 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CDKN2DP55273 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC17.94■□□□□ 0.46
CDKN2DP55273 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CDKN2DP55273 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC17.94■□□□□ 0.46
CDKN2DP55273 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.94■□□□□ 0.46
CDKN2DP55273 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.94■□□□□ 0.46
CDKN2DP55273 NARF-204ENST00000390006 1766 ntTSL 2 BASIC17.94■□□□□ 0.46
CDKN2DP55273 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CDKN2DP55273 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDKN2DP55273 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDKN2DP55273 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDKN2DP55273 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CDKN2DP55273 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDKN2DP55273 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDKN2DP55273 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.93■□□□□ 0.46
CDKN2DP55273 KRT18P55-202ENST00000578578 1546 ntBASIC17.93■□□□□ 0.46
CDKN2DP55273 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDKN2DP55273 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CDKN2DP55273 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDKN2DP55273 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDKN2DP55273 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDKN2DP55273 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDKN2DP55273 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDKN2DP55273 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDKN2DP55273 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDKN2DP55273 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDKN2DP55273 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.93■□□□□ 0.46
CDKN2DP55273 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDKN2DP55273 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.93■□□□□ 0.46
CDKN2DP55273 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDKN2DP55273 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC17.93■□□□□ 0.46
CDKN2DP55273 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.93■□□□□ 0.46
CDKN2DP55273 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CDKN2DP55273 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.93■□□□□ 0.46
CDKN2DP55273 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC17.93■□□□□ 0.46
CDKN2DP55273 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDKN2DP55273 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDKN2DP55273 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.93■□□□□ 0.46
CDKN2DP55273 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDKN2DP55273 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CDKN2DP55273 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDKN2DP55273 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC17.93■□□□□ 0.46
CDKN2DP55273 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CDKN2DP55273 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC17.93■□□□□ 0.46
CDKN2DP55273 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
CDKN2DP55273 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CDKN2DP55273 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDKN2DP55273 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDKN2DP55273 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDKN2DP55273 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
CDKN2DP55273 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CDKN2DP55273 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
CDKN2DP55273 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CDKN2DP55273 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.92■□□□□ 0.46
CDKN2DP55273 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CDKN2DP55273 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
CDKN2DP55273 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC17.92■□□□□ 0.46
CDKN2DP55273 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.92■□□□□ 0.46
CDKN2DP55273 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.92■□□□□ 0.46
CDKN2DP55273 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CDKN2DP55273 AC012306.2-201ENST00000609350 630 ntBASIC17.92■□□□□ 0.46
CDKN2DP55273 AC133561.5-201ENST00000635547 218 ntBASIC17.92■□□□□ 0.46
CDKN2DP55273 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms