Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NR1H2P55055 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC17.24■□□□□ 0.35
NR1H2P55055 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.24■□□□□ 0.35
NR1H2P55055 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NR1H2P55055 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NR1H2P55055 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NR1H2P55055 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NR1H2P55055 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NR1H2P55055 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC17.24■□□□□ 0.35
NR1H2P55055 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NR1H2P55055 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NR1H2P55055 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
NR1H2P55055 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NR1H2P55055 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
NR1H2P55055 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NR1H2P55055 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.24■□□□□ 0.35
NR1H2P55055 AF186192.3-201ENST00000583427 947 ntBASIC17.24■□□□□ 0.35
NR1H2P55055 RPS15-203ENST00000586096 570 ntTSL 2 BASIC17.24■□□□□ 0.35
NR1H2P55055 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
NR1H2P55055 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
NR1H2P55055 SENP5-201ENST00000323460 6308 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NR1H2P55055 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.24■□□□□ 0.35
NR1H2P55055 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
NR1H2P55055 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
NR1H2P55055 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
NR1H2P55055 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
NR1H2P55055 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NR1H2P55055 VAV2-203ENST00000406606 4691 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NR1H2P55055 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
NR1H2P55055 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
NR1H2P55055 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.24■□□□□ 0.35
NR1H2P55055 AC124283.5-201ENST00000624661 1809 ntBASIC17.24■□□□□ 0.35
NR1H2P55055 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC17.23■□□□□ 0.35
NR1H2P55055 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NR1H2P55055 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.23■□□□□ 0.35
NR1H2P55055 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC17.23■□□□□ 0.35
NR1H2P55055 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NR1H2P55055 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC17.23■□□□□ 0.35
NR1H2P55055 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.23■□□□□ 0.35
NR1H2P55055 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.23■□□□□ 0.35
NR1H2P55055 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NR1H2P55055 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NR1H2P55055 AC104417.2-201ENST00000562989 1793 ntBASIC17.23■□□□□ 0.35
NR1H2P55055 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NR1H2P55055 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.23■□□□□ 0.35
NR1H2P55055 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
NR1H2P55055 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
NR1H2P55055 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
NR1H2P55055 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC17.23■□□□□ 0.35
NR1H2P55055 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
NR1H2P55055 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC17.23■□□□□ 0.35
NR1H2P55055 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NR1H2P55055 AL355355.2-201ENST00000442321 338 ntBASIC17.23■□□□□ 0.35
NR1H2P55055 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC17.23■□□□□ 0.35
NR1H2P55055 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.23■□□□□ 0.35
NR1H2P55055 C16orf74-202ENST00000602583 1237 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
NR1H2P55055 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.23■□□□□ 0.35
NR1H2P55055 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NR1H2P55055 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC17.23■□□□□ 0.35
NR1H2P55055 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NR1H2P55055 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NR1H2P55055 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NR1H2P55055 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.23■□□□□ 0.35
NR1H2P55055 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
NR1H2P55055 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
NR1H2P55055 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.23■□□□□ 0.35
NR1H2P55055 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC17.23■□□□□ 0.35
NR1H2P55055 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
NR1H2P55055 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
NR1H2P55055 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
NR1H2P55055 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
NR1H2P55055 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NR1H2P55055 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.22■□□□□ 0.35
NR1H2P55055 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.22■□□□□ 0.35
NR1H2P55055 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC17.22■□□□□ 0.35
NR1H2P55055 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
NR1H2P55055 AP001094.4-201ENST00000579008 2176 ntBASIC17.22■□□□□ 0.35
NR1H2P55055 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NR1H2P55055 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
NR1H2P55055 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC17.22■□□□□ 0.35
NR1H2P55055 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NR1H2P55055 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
NR1H2P55055 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NR1H2P55055 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
NR1H2P55055 CALM3-202ENST00000391918 702 ntTSL 2 BASIC17.22■□□□□ 0.35
NR1H2P55055 FAM210CP-201ENST00000445714 574 ntBASIC17.22■□□□□ 0.35
NR1H2P55055 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
NR1H2P55055 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.22■□□□□ 0.35
NR1H2P55055 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.22■□□□□ 0.35
NR1H2P55055 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC17.22■□□□□ 0.35
NR1H2P55055 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC17.22■□□□□ 0.35
NR1H2P55055 SNX21-213ENST00000614929 587 ntTSL 5 BASIC17.22■□□□□ 0.35
NR1H2P55055 AC026471.5-201ENST00000615068 467 ntBASIC17.22■□□□□ 0.35
NR1H2P55055 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
NR1H2P55055 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
NR1H2P55055 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
NR1H2P55055 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC17.22■□□□□ 0.35
NR1H2P55055 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC17.22■□□□□ 0.35
NR1H2P55055 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC17.22■□□□□ 0.35
NR1H2P55055 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms