Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PMS1P54277 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
PMS1P54277 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
PMS1P54277 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PMS1P54277 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC19.99■□□□□ 0.79
PMS1P54277 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
PMS1P54277 KRT18P22-201ENST00000402024 1347 ntBASIC19.99■□□□□ 0.79
PMS1P54277 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PMS1P54277 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PMS1P54277 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PMS1P54277 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PMS1P54277 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PMS1P54277 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PMS1P54277 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
PMS1P54277 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PMS1P54277 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PMS1P54277 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
PMS1P54277 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.98■□□□□ 0.79
PMS1P54277 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC19.98■□□□□ 0.79
PMS1P54277 AC010203.1-204ENST00000548782 407 ntBASIC19.98■□□□□ 0.79
PMS1P54277 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC19.98■□□□□ 0.79
PMS1P54277 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.98■□□□□ 0.79
PMS1P54277 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PMS1P54277 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PMS1P54277 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PMS1P54277 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
PMS1P54277 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
PMS1P54277 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
PMS1P54277 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
PMS1P54277 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
PMS1P54277 PP12613-201ENST00000424958 2230 ntBASIC19.98■□□□□ 0.79
PMS1P54277 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PMS1P54277 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PMS1P54277 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PMS1P54277 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PMS1P54277 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PMS1P54277 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PMS1P54277 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PMS1P54277 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PMS1P54277 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.97■□□□□ 0.79
PMS1P54277 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PMS1P54277 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
PMS1P54277 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PMS1P54277 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PMS1P54277 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
PMS1P54277 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC19.97■□□□□ 0.79
PMS1P54277 GPX4-207ENST00000589115 812 ntTSL 2 BASIC19.97■□□□□ 0.79
PMS1P54277 USF2-205ENST00000594064 1179 ntTSL 2 BASIC19.97■□□□□ 0.79
PMS1P54277 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC19.97■□□□□ 0.79
PMS1P54277 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PMS1P54277 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.97■□□□□ 0.79
PMS1P54277 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.97■□□□□ 0.79
PMS1P54277 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
PMS1P54277 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC19.97■□□□□ 0.79
PMS1P54277 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.97■□□□□ 0.79
PMS1P54277 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
PMS1P54277 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC19.97■□□□□ 0.79
PMS1P54277 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
PMS1P54277 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC19.97■□□□□ 0.79
PMS1P54277 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PMS1P54277 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC19.96■□□□□ 0.79
PMS1P54277 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC19.96■□□□□ 0.79
PMS1P54277 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC19.96■□□□□ 0.79
PMS1P54277 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.96■□□□□ 0.79
PMS1P54277 LINC00167-201ENST00000530583 1419 ntBASIC19.96■□□□□ 0.79
PMS1P54277 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
PMS1P54277 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PMS1P54277 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.96■□□□□ 0.79
PMS1P54277 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PMS1P54277 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC19.96■□□□□ 0.79
PMS1P54277 SLC25A3P1-201ENST00000443844 931 ntBASIC19.96■□□□□ 0.79
PMS1P54277 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.96■□□□□ 0.79
PMS1P54277 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.96■□□□□ 0.79
PMS1P54277 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.96■□□□□ 0.79
PMS1P54277 AL512604.3-201ENST00000569583 964 ntBASIC19.96■□□□□ 0.79
PMS1P54277 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.96■□□□□ 0.79
PMS1P54277 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC19.96■□□□□ 0.79
PMS1P54277 AL023973.1-201ENST00000624619 620 ntBASIC19.96■□□□□ 0.79
PMS1P54277 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC19.96■□□□□ 0.79
PMS1P54277 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PMS1P54277 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.96■□□□□ 0.79
PMS1P54277 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
PMS1P54277 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC19.96■□□□□ 0.79
PMS1P54277 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
PMS1P54277 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
PMS1P54277 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
PMS1P54277 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PMS1P54277 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PMS1P54277 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.95■□□□□ 0.78
PMS1P54277 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PMS1P54277 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
PMS1P54277 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
PMS1P54277 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC19.95■□□□□ 0.78
PMS1P54277 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PMS1P54277 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PMS1P54277 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.95■□□□□ 0.78
PMS1P54277 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PMS1P54277 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
PMS1P54277 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC19.95■□□□□ 0.78
PMS1P54277 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC19.95■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms