Protein–RNA interactions for Protein: P52954

LBX1, Transcription factor LBX1, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LBX1P52954 PSMA7-201ENST00000370858 925 ntTSL 2 BASIC20.38■□□□□ 0.85
LBX1P52954 MIR149-201ENST00000384879 89 ntBASIC20.38■□□□□ 0.85
LBX1P52954 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC20.38■□□□□ 0.85
LBX1P52954 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC20.38■□□□□ 0.85
LBX1P52954 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC20.38■□□□□ 0.85
LBX1P52954 AC069335.1-201ENST00000489972 472 ntBASIC20.38■□□□□ 0.85
LBX1P52954 PARP8-206ENST00000503665 572 ntTSL 4 BASIC20.38■□□□□ 0.85
LBX1P52954 SERBP1P5-201ENST00000510079 1181 ntBASIC20.38■□□□□ 0.85
LBX1P52954 RIN3-211ENST00000557762 517 ntTSL 3 BASIC20.38■□□□□ 0.85
LBX1P52954 CYB561-217ENST00000582997 877 ntTSL 5 BASIC20.38■□□□□ 0.85
LBX1P52954 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC20.38■□□□□ 0.85
LBX1P52954 AD001527.2-201ENST00000622994 785 ntBASIC20.38■□□□□ 0.85
LBX1P52954 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LBX1P52954 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
LBX1P52954 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LBX1P52954 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
LBX1P52954 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LBX1P52954 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC20.38■□□□□ 0.85
LBX1P52954 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
LBX1P52954 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
LBX1P52954 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.37■□□□□ 0.85
LBX1P52954 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC20.37■□□□□ 0.85
LBX1P52954 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LBX1P52954 ME2-216ENST00000639850 2331 ntTSL 5 BASIC20.37■□□□□ 0.85
LBX1P52954 DUOXA1-202ENST00000430224 1317 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LBX1P52954 BICD1-205ENST00000550207 1328 ntTSL 3 BASIC20.37■□□□□ 0.85
LBX1P52954 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LBX1P52954 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LBX1P52954 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LBX1P52954 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC20.37■□□□□ 0.85
LBX1P52954 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC20.37■□□□□ 0.85
LBX1P52954 AC112698.1-201ENST00000510299 916 ntBASIC20.37■□□□□ 0.85
LBX1P52954 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC20.37■□□□□ 0.85
LBX1P52954 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC20.37■□□□□ 0.85
LBX1P52954 AL512356.2-201ENST00000546955 174 ntBASIC20.37■□□□□ 0.85
LBX1P52954 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC20.37■□□□□ 0.85
LBX1P52954 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC20.37■□□□□ 0.85
LBX1P52954 AC099343.3-201ENST00000605834 2503 ntBASIC20.37■□□□□ 0.85
LBX1P52954 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LBX1P52954 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.37■□□□□ 0.85
LBX1P52954 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LBX1P52954 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LBX1P52954 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
LBX1P52954 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LBX1P52954 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
LBX1P52954 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
LBX1P52954 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
LBX1P52954 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC20.36■□□□□ 0.85
LBX1P52954 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LBX1P52954 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC20.36■□□□□ 0.85
LBX1P52954 LYPLA2-204ENST00000374505 907 ntTSL 3 BASIC20.36■□□□□ 0.85
LBX1P52954 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC20.36■□□□□ 0.85
LBX1P52954 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC20.36■□□□□ 0.85
LBX1P52954 BAD-207ENST00000544785 525 ntTSL 3 BASIC20.36■□□□□ 0.85
LBX1P52954 IGHV3OR16-6-201ENST00000568775 360 ntBASIC20.36■□□□□ 0.85
LBX1P52954 OR7E47P-204ENST00000575924 449 ntBASIC20.36■□□□□ 0.85
LBX1P52954 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC20.36■□□□□ 0.85
LBX1P52954 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LBX1P52954 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
LBX1P52954 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.36■□□□□ 0.85
LBX1P52954 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LBX1P52954 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC20.36■□□□□ 0.85
LBX1P52954 CU639417.3-201ENST00000624240 1404 ntBASIC20.36■□□□□ 0.85
LBX1P52954 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
LBX1P52954 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.35■□□□□ 0.85
LBX1P52954 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
LBX1P52954 AC020907.5-201ENST00000624372 1936 ntBASIC20.35■□□□□ 0.85
LBX1P52954 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
LBX1P52954 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LBX1P52954 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LBX1P52954 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LBX1P52954 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LBX1P52954 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC20.35■□□□□ 0.85
LBX1P52954 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
LBX1P52954 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LBX1P52954 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
LBX1P52954 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.35■□□□□ 0.85
LBX1P52954 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
LBX1P52954 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
LBX1P52954 WRB-204ENST00000398753 699 ntTSL 3 BASIC20.35■□□□□ 0.85
LBX1P52954 ADH5P3-201ENST00000433842 1137 ntBASIC20.35■□□□□ 0.85
LBX1P52954 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC20.35■□□□□ 0.85
LBX1P52954 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC20.35■□□□□ 0.85
LBX1P52954 AC010336.2-201ENST00000564226 506 ntBASIC20.35■□□□□ 0.85
LBX1P52954 AC140878.1-201ENST00000565277 250 ntBASIC20.35■□□□□ 0.85
LBX1P52954 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC20.35■□□□□ 0.85
LBX1P52954 MED16-214ENST00000617672 554 ntTSL 5 BASIC20.35■□□□□ 0.85
LBX1P52954 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LBX1P52954 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.35■□□□□ 0.85
LBX1P52954 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC20.35■□□□□ 0.85
LBX1P52954 AL391422.3-201ENST00000603791 2761 ntBASIC20.35■□□□□ 0.85
LBX1P52954 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.35■□□□□ 0.85
LBX1P52954 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC20.35■□□□□ 0.85
LBX1P52954 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
LBX1P52954 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LBX1P52954 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LBX1P52954 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
LBX1P52954 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
LBX1P52954 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
LBX1P52954 AC006116.8-202ENST00000587620 1550 ntBASIC20.34■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms