Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HMGA2P52926 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HMGA2P52926 CRYGFP-201ENST00000418459 633 ntBASIC16.57■□□□□ 0.24
HMGA2P52926 NT5C3B-203ENST00000435506 975 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
HMGA2P52926 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC16.57■□□□□ 0.24
HMGA2P52926 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HMGA2P52926 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC16.57■□□□□ 0.24
HMGA2P52926 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC16.57■□□□□ 0.24
HMGA2P52926 AP005242.2-201ENST00000580065 1175 ntBASIC16.57■□□□□ 0.24
HMGA2P52926 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.57■□□□□ 0.24
HMGA2P52926 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HMGA2P52926 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HMGA2P52926 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HMGA2P52926 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
HMGA2P52926 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
HMGA2P52926 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HMGA2P52926 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
HMGA2P52926 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
HMGA2P52926 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
HMGA2P52926 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
HMGA2P52926 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.56■□□□□ 0.24
HMGA2P52926 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.56■□□□□ 0.24
HMGA2P52926 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGA2P52926 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
HMGA2P52926 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.56■□□□□ 0.24
HMGA2P52926 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGA2P52926 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGA2P52926 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HMGA2P52926 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGA2P52926 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGA2P52926 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC16.56■□□□□ 0.24
HMGA2P52926 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HMGA2P52926 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.56■□□□□ 0.24
HMGA2P52926 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGA2P52926 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGA2P52926 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC16.56■□□□□ 0.24
HMGA2P52926 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HMGA2P52926 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
HMGA2P52926 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGA2P52926 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HMGA2P52926 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.56■□□□□ 0.24
HMGA2P52926 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
HMGA2P52926 SLC25A1P2-201ENST00000430693 912 ntBASIC16.56■□□□□ 0.24
HMGA2P52926 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGA2P52926 TSPY17P-201ENST00000450329 467 ntBASIC16.56■□□□□ 0.24
HMGA2P52926 AP003041.3-201ENST00000527151 707 ntBASIC16.56■□□□□ 0.24
HMGA2P52926 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC16.56■□□□□ 0.24
HMGA2P52926 ETFA-216ENST00000560726 942 ntTSL 3 BASIC16.56■□□□□ 0.24
HMGA2P52926 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGA2P52926 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
HMGA2P52926 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
HMGA2P52926 MAP7-203ENST00000438100 2633 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
HMGA2P52926 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGA2P52926 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGA2P52926 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HMGA2P52926 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.56■□□□□ 0.24
HMGA2P52926 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
HMGA2P52926 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
HMGA2P52926 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGA2P52926 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.55■□□□□ 0.24
HMGA2P52926 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
HMGA2P52926 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGA2P52926 AC100803.2-201ENST00000562459 1963 ntBASIC16.55■□□□□ 0.24
HMGA2P52926 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGA2P52926 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC16.55■□□□□ 0.24
HMGA2P52926 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGA2P52926 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HMGA2P52926 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
HMGA2P52926 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HMGA2P52926 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGA2P52926 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGA2P52926 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HMGA2P52926 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
HMGA2P52926 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC16.55■□□□□ 0.24
HMGA2P52926 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC16.55■□□□□ 0.24
HMGA2P52926 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC16.55■□□□□ 0.24
HMGA2P52926 REXO1L10P-201ENST00000615707 1290 ntBASIC16.55■□□□□ 0.24
HMGA2P52926 REXO1L12P-201ENST00000622156 912 ntBASIC16.55■□□□□ 0.24
HMGA2P52926 AC112497.1-201ENST00000624824 639 ntBASIC16.55■□□□□ 0.24
HMGA2P52926 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGA2P52926 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGA2P52926 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGA2P52926 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGA2P52926 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGA2P52926 FTSJ1-201ENST00000019019 1986 ntAPPRIS ALT1 TSL 2 BASIC16.55■□□□□ 0.24
HMGA2P52926 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGA2P52926 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
HMGA2P52926 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
HMGA2P52926 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.54■□□□□ 0.24
HMGA2P52926 LINC00304-203ENST00000565008 1864 ntBASIC16.54■□□□□ 0.24
HMGA2P52926 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.54■□□□□ 0.24
HMGA2P52926 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGA2P52926 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
HMGA2P52926 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.54■□□□□ 0.24
HMGA2P52926 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGA2P52926 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
HMGA2P52926 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGA2P52926 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
HMGA2P52926 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
HMGA2P52926 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms