Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC19.9■□□□□ 0.78
CLCN3P51790 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC19.9■□□□□ 0.78
CLCN3P51790 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLCN3P51790 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLCN3P51790 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLCN3P51790 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.9■□□□□ 0.78
CLCN3P51790 TP73-AS1-210ENST00000637775 1455 ntBASIC19.9■□□□□ 0.78
CLCN3P51790 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
CLCN3P51790 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLCN3P51790 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLCN3P51790 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CLCN3P51790 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CLCN3P51790 PHGDH-209ENST00000641074 1780 ntBASIC19.9■□□□□ 0.78
CLCN3P51790 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CLCN3P51790 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.89■□□□□ 0.78
CLCN3P51790 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CLCN3P51790 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLCN3P51790 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLCN3P51790 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLCN3P51790 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLCN3P51790 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLCN3P51790 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLCN3P51790 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC19.89■□□□□ 0.77
CLCN3P51790 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLCN3P51790 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLCN3P51790 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.89■□□□□ 0.77
CLCN3P51790 THAP5-204ENST00000438865 868 ntTSL 2 BASIC19.89■□□□□ 0.77
CLCN3P51790 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC19.89■□□□□ 0.77
CLCN3P51790 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLCN3P51790 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC19.89■□□□□ 0.77
CLCN3P51790 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CLCN3P51790 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC19.89■□□□□ 0.77
CLCN3P51790 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
CLCN3P51790 AF238378.1-201ENST00000526806 358 ntBASIC19.89■□□□□ 0.77
CLCN3P51790 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLCN3P51790 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.89■□□□□ 0.77
CLCN3P51790 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
CLCN3P51790 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC19.89■□□□□ 0.77
CLCN3P51790 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLCN3P51790 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
CLCN3P51790 AL121912.1-201ENST00000603683 238 ntBASIC19.89■□□□□ 0.77
CLCN3P51790 AL138831.2-201ENST00000606564 490 ntBASIC19.89■□□□□ 0.77
CLCN3P51790 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.89■□□□□ 0.77
CLCN3P51790 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.89■□□□□ 0.77
CLCN3P51790 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CLCN3P51790 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.89■□□□□ 0.77
CLCN3P51790 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC19.89■□□□□ 0.77
CLCN3P51790 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CLCN3P51790 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLCN3P51790 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.88■□□□□ 0.77
CLCN3P51790 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.88■□□□□ 0.77
CLCN3P51790 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
CLCN3P51790 TNXA-203ENST00000507684 2038 ntBASIC19.88■□□□□ 0.77
CLCN3P51790 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
CLCN3P51790 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLCN3P51790 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLCN3P51790 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLCN3P51790 CCS-201ENST00000310190 942 ntTSL 5 BASIC19.88■□□□□ 0.77
CLCN3P51790 EMD-201ENST00000369835 966 ntTSL 3 BASIC19.88■□□□□ 0.77
CLCN3P51790 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CLCN3P51790 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC19.88■□□□□ 0.77
CLCN3P51790 AC112698.1-201ENST00000510299 916 ntBASIC19.88■□□□□ 0.77
CLCN3P51790 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC19.88■□□□□ 0.77
CLCN3P51790 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CLCN3P51790 AP002469.2-201ENST00000531724 424 ntBASIC19.88■□□□□ 0.77
CLCN3P51790 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLCN3P51790 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLCN3P51790 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC19.88■□□□□ 0.77
CLCN3P51790 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLCN3P51790 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.88■□□□□ 0.77
CLCN3P51790 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLCN3P51790 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
CLCN3P51790 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLCN3P51790 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CLCN3P51790 BX323043.1-201ENST00000641006 1765 ntBASIC19.88■□□□□ 0.77
CLCN3P51790 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLCN3P51790 AC125634.1-201ENST00000438758 1403 ntBASIC19.87■□□□□ 0.77
CLCN3P51790 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLCN3P51790 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.87■□□□□ 0.77
CLCN3P51790 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLCN3P51790 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLCN3P51790 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLCN3P51790 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLCN3P51790 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLCN3P51790 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLCN3P51790 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLCN3P51790 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC19.87■□□□□ 0.77
CLCN3P51790 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC19.87■□□□□ 0.77
CLCN3P51790 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.87■□□□□ 0.77
CLCN3P51790 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.87■□□□□ 0.77
CLCN3P51790 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLCN3P51790 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLCN3P51790 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLCN3P51790 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLCN3P51790 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC19.87■□□□□ 0.77
CLCN3P51790 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLCN3P51790 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CLCN3P51790 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLCN3P51790 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CLCN3P51790 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms