Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
USP11P51784 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
USP11P51784 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.48■□□□□ 0.87
USP11P51784 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
USP11P51784 MTCL1P1-201ENST00000446207 792 ntBASIC20.48■□□□□ 0.87
USP11P51784 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC20.48■□□□□ 0.87
USP11P51784 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
USP11P51784 NMU-205ENST00000511469 756 ntTSL 3 BASIC20.48■□□□□ 0.87
USP11P51784 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.48■□□□□ 0.87
USP11P51784 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
USP11P51784 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC20.48■□□□□ 0.87
USP11P51784 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
USP11P51784 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
USP11P51784 REXO1L9P-201ENST00000604264 2108 ntBASIC20.48■□□□□ 0.87
USP11P51784 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.48■□□□□ 0.87
USP11P51784 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
USP11P51784 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
USP11P51784 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
USP11P51784 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
USP11P51784 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
USP11P51784 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
USP11P51784 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP11P51784 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP11P51784 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP11P51784 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
USP11P51784 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP11P51784 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
USP11P51784 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP11P51784 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC20.47■□□□□ 0.87
USP11P51784 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC20.47■□□□□ 0.87
USP11P51784 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
USP11P51784 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP11P51784 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC20.47■□□□□ 0.87
USP11P51784 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
USP11P51784 PPIH-202ENST00000372549 327 ntTSL 3 BASIC20.47■□□□□ 0.87
USP11P51784 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.47■□□□□ 0.87
USP11P51784 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
USP11P51784 TPSP2-201ENST00000561760 610 ntBASIC20.47■□□□□ 0.87
USP11P51784 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC20.47■□□□□ 0.87
USP11P51784 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC20.47■□□□□ 0.87
USP11P51784 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.47■□□□□ 0.87
USP11P51784 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP11P51784 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.47■□□□□ 0.87
USP11P51784 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
USP11P51784 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
USP11P51784 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP11P51784 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP11P51784 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
USP11P51784 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
USP11P51784 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
USP11P51784 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
USP11P51784 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP11P51784 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP11P51784 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP11P51784 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP11P51784 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.46■□□□□ 0.87
USP11P51784 AL354751.1-201ENST00000412768 1863 ntBASIC20.46■□□□□ 0.87
USP11P51784 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
USP11P51784 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
USP11P51784 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP11P51784 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP11P51784 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
USP11P51784 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP11P51784 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.46■□□□□ 0.87
USP11P51784 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP11P51784 AC092329.2-201ENST00000598402 547 ntBASIC20.46■□□□□ 0.87
USP11P51784 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
USP11P51784 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
USP11P51784 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP11P51784 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
USP11P51784 AC022898.2-201ENST00000616822 1312 ntBASIC20.46■□□□□ 0.87
USP11P51784 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.46■□□□□ 0.87
USP11P51784 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
USP11P51784 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.46■□□□□ 0.87
USP11P51784 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
USP11P51784 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
USP11P51784 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
USP11P51784 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
USP11P51784 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
USP11P51784 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.45■□□□□ 0.86
USP11P51784 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP11P51784 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.45■□□□□ 0.86
USP11P51784 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP11P51784 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
USP11P51784 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP11P51784 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC20.45■□□□□ 0.86
USP11P51784 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP11P51784 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP11P51784 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP11P51784 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
USP11P51784 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC20.45■□□□□ 0.86
USP11P51784 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP11P51784 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
USP11P51784 AL845331.1-201ENST00000424978 1190 ntBASIC20.45■□□□□ 0.86
USP11P51784 AC246785.2-201ENST00000432512 513 ntBASIC20.45■□□□□ 0.86
USP11P51784 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC20.45■□□□□ 0.86
USP11P51784 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC20.45■□□□□ 0.86
USP11P51784 AC112698.1-201ENST00000510299 916 ntBASIC20.45■□□□□ 0.86
USP11P51784 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.45■□□□□ 0.86
USP11P51784 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.45■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms