Protein–RNA interactions for Protein: P51160

PDE6C, Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha', humanhuman

Predictions only

Length 858 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6CP51160 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
PDE6CP51160 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.63■□□□□ 0.73
PDE6CP51160 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PDE6CP51160 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDE6CP51160 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.63■□□□□ 0.73
PDE6CP51160 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDE6CP51160 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.63■□□□□ 0.73
PDE6CP51160 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.63■□□□□ 0.73
PDE6CP51160 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
PDE6CP51160 CD320-202ENST00000537716 1119 ntTSL 2 BASIC19.63■□□□□ 0.73
PDE6CP51160 GCSHP2-201ENST00000560971 527 ntBASIC19.63■□□□□ 0.73
PDE6CP51160 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.63■□□□□ 0.73
PDE6CP51160 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC19.63■□□□□ 0.73
PDE6CP51160 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC19.63■□□□□ 0.73
PDE6CP51160 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PDE6CP51160 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
PDE6CP51160 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PDE6CP51160 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDE6CP51160 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PDE6CP51160 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC19.63■□□□□ 0.73
PDE6CP51160 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDE6CP51160 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC19.63■□□□□ 0.73
PDE6CP51160 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC19.63■□□□□ 0.73
PDE6CP51160 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PDE6CP51160 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC19.62■□□□□ 0.73
PDE6CP51160 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.62■□□□□ 0.73
PDE6CP51160 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDE6CP51160 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.62■□□□□ 0.73
PDE6CP51160 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDE6CP51160 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDE6CP51160 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDE6CP51160 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PDE6CP51160 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PDE6CP51160 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC19.62■□□□□ 0.73
PDE6CP51160 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PDE6CP51160 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDE6CP51160 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PDE6CP51160 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.62■□□□□ 0.73
PDE6CP51160 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
PDE6CP51160 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDE6CP51160 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDE6CP51160 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.62■□□□□ 0.73
PDE6CP51160 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC19.62■□□□□ 0.73
PDE6CP51160 AC104390.1-201ENST00000555663 520 ntBASIC19.62■□□□□ 0.73
PDE6CP51160 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC19.62■□□□□ 0.73
PDE6CP51160 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.62■□□□□ 0.73
PDE6CP51160 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDE6CP51160 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDE6CP51160 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.62■□□□□ 0.73
PDE6CP51160 POR-209ENST00000439269 1858 ntTSL 2 BASIC19.62■□□□□ 0.73
PDE6CP51160 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDE6CP51160 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDE6CP51160 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDE6CP51160 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC19.62■□□□□ 0.73
PDE6CP51160 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
PDE6CP51160 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
PDE6CP51160 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.62■□□□□ 0.73
PDE6CP51160 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.62■□□□□ 0.73
PDE6CP51160 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
PDE6CP51160 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
PDE6CP51160 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PDE6CP51160 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PDE6CP51160 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDE6CP51160 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PDE6CP51160 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC19.61■□□□□ 0.73
PDE6CP51160 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC19.61■□□□□ 0.73
PDE6CP51160 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDE6CP51160 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDE6CP51160 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDE6CP51160 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDE6CP51160 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
PDE6CP51160 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDE6CP51160 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDE6CP51160 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDE6CP51160 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDE6CP51160 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDE6CP51160 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PDE6CP51160 CD81-212ENST00000526072 1172 ntTSL 5 BASIC19.61■□□□□ 0.73
PDE6CP51160 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC19.61■□□□□ 0.73
PDE6CP51160 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
PDE6CP51160 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PDE6CP51160 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
PDE6CP51160 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDE6CP51160 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC19.61■□□□□ 0.73
PDE6CP51160 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC19.61■□□□□ 0.73
PDE6CP51160 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PDE6CP51160 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC19.61■□□□□ 0.73
PDE6CP51160 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDE6CP51160 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDE6CP51160 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC19.61■□□□□ 0.73
PDE6CP51160 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC19.61■□□□□ 0.73
PDE6CP51160 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.61■□□□□ 0.73
PDE6CP51160 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC19.61■□□□□ 0.73
PDE6CP51160 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC19.61■□□□□ 0.73
PDE6CP51160 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC19.61■□□□□ 0.73
PDE6CP51160 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDE6CP51160 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDE6CP51160 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
PDE6CP51160 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
PDE6CP51160 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms