Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CPT1AP50416 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CPT1AP50416 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
CPT1AP50416 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPT1AP50416 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC20.05■□□□□ 0.8
CPT1AP50416 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
CPT1AP50416 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPT1AP50416 MIR1233-2-201ENST00000408138 82 ntBASIC20.05■□□□□ 0.8
CPT1AP50416 MIR1233-1-201ENST00000408722 82 ntBASIC20.05■□□□□ 0.8
CPT1AP50416 BX842568.4-201ENST00000421222 227 ntBASIC20.05■□□□□ 0.8
CPT1AP50416 COX10-202ENST00000429152 875 ntTSL 2 BASIC20.05■□□□□ 0.8
CPT1AP50416 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
CPT1AP50416 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPT1AP50416 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC20.05■□□□□ 0.8
CPT1AP50416 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPT1AP50416 AC025062.2-201ENST00000605477 670 ntBASIC20.05■□□□□ 0.8
CPT1AP50416 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPT1AP50416 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC20.05■□□□□ 0.8
CPT1AP50416 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.05■□□□□ 0.8
CPT1AP50416 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
CPT1AP50416 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CPT1AP50416 AC005082.1-201ENST00000413042 2259 ntBASIC20.05■□□□□ 0.8
CPT1AP50416 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.05■□□□□ 0.8
CPT1AP50416 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.05■□□□□ 0.8
CPT1AP50416 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
CPT1AP50416 AC097374.2-201ENST00000618617 1306 ntBASIC20.04■□□□□ 0.8
CPT1AP50416 AC104109.2-201ENST00000602919 1418 ntBASIC20.04■□□□□ 0.8
CPT1AP50416 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPT1AP50416 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPT1AP50416 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CPT1AP50416 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPT1AP50416 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPT1AP50416 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPT1AP50416 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.04■□□□□ 0.8
CPT1AP50416 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.04■□□□□ 0.8
CPT1AP50416 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CPT1AP50416 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.04■□□□□ 0.8
CPT1AP50416 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPT1AP50416 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPT1AP50416 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPT1AP50416 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPT1AP50416 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPT1AP50416 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
CPT1AP50416 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.04■□□□□ 0.8
CPT1AP50416 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPT1AP50416 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
CPT1AP50416 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
CPT1AP50416 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
CPT1AP50416 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.03■□□□□ 0.8
CPT1AP50416 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CPT1AP50416 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPT1AP50416 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.03■□□□□ 0.8
CPT1AP50416 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.03■□□□□ 0.8
CPT1AP50416 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPT1AP50416 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CPT1AP50416 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CPT1AP50416 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPT1AP50416 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.03■□□□□ 0.8
CPT1AP50416 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPT1AP50416 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.03■□□□□ 0.8
CPT1AP50416 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC20.03■□□□□ 0.8
CPT1AP50416 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC20.03■□□□□ 0.8
CPT1AP50416 AC092910.1-201ENST00000482027 1129 ntBASIC20.03■□□□□ 0.8
CPT1AP50416 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
CPT1AP50416 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.03■□□□□ 0.8
CPT1AP50416 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.03■□□□□ 0.8
CPT1AP50416 AC027601.4-201ENST00000611259 610 ntBASIC20.03■□□□□ 0.8
CPT1AP50416 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.03■□□□□ 0.8
CPT1AP50416 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPT1AP50416 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CPT1AP50416 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPT1AP50416 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
CPT1AP50416 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CPT1AP50416 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPT1AP50416 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
CPT1AP50416 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
CPT1AP50416 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.03■□□□□ 0.8
CPT1AP50416 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC20.02■□□□□ 0.8
CPT1AP50416 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.8
CPT1AP50416 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPT1AP50416 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
CPT1AP50416 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC20.02■□□□□ 0.8
CPT1AP50416 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CPT1AP50416 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPT1AP50416 AC007967.3-201ENST00000434308 558 ntBASIC20.02■□□□□ 0.8
CPT1AP50416 AC098831.1-202ENST00000438821 336 ntBASIC20.02■□□□□ 0.8
CPT1AP50416 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.02■□□□□ 0.8
CPT1AP50416 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC20.02■□□□□ 0.8
CPT1AP50416 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC20.02■□□□□ 0.8
CPT1AP50416 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC20.02■□□□□ 0.8
CPT1AP50416 NKAPP1-205ENST00000585790 367 ntBASIC20.02■□□□□ 0.8
CPT1AP50416 MTDHP4-201ENST00000600287 670 ntBASIC20.02■□□□□ 0.8
CPT1AP50416 AC008735.5-201ENST00000623544 497 ntBASIC20.02■□□□□ 0.8
CPT1AP50416 AP000867.4-201ENST00000641616 219 ntBASIC20.02■□□□□ 0.8
CPT1AP50416 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
CPT1AP50416 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC20.02■□□□□ 0.8
CPT1AP50416 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPT1AP50416 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPT1AP50416 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
CPT1AP50416 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 50.8 ms