Protein–RNA interactions for Protein: P43681

CHRNA4, Neuronal acetylcholine receptor subunit alpha-4, humanhuman

Predictions only

Length 627 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4P43681 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNA4P43681 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNA4P43681 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.33■□□□□ 0.52
CHRNA4P43681 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CHRNA4P43681 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNA4P43681 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNA4P43681 AC063952.2-201ENST00000498792 1227 ntBASIC18.33■□□□□ 0.52
CHRNA4P43681 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNA4P43681 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.33■□□□□ 0.52
CHRNA4P43681 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.33■□□□□ 0.52
CHRNA4P43681 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNA4P43681 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNA4P43681 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.33■□□□□ 0.52
CHRNA4P43681 AC132938.6-201ENST00000623828 1655 ntBASIC18.33■□□□□ 0.52
CHRNA4P43681 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC18.33■□□□□ 0.52
CHRNA4P43681 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC18.33■□□□□ 0.52
CHRNA4P43681 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC18.33■□□□□ 0.52
CHRNA4P43681 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNA4P43681 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNA4P43681 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNA4P43681 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNA4P43681 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNA4P43681 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CHRNA4P43681 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC18.32■□□□□ 0.52
CHRNA4P43681 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC18.32■□□□□ 0.52
CHRNA4P43681 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.32■□□□□ 0.52
CHRNA4P43681 AC008764.6-201ENST00000595909 2069 ntBASIC18.32■□□□□ 0.52
CHRNA4P43681 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNA4P43681 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNA4P43681 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CHRNA4P43681 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNA4P43681 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNA4P43681 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNA4P43681 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.32■□□□□ 0.52
CHRNA4P43681 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.32■□□□□ 0.52
CHRNA4P43681 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC18.32■□□□□ 0.52
CHRNA4P43681 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC18.32■□□□□ 0.52
CHRNA4P43681 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC18.32■□□□□ 0.52
CHRNA4P43681 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC18.32■□□□□ 0.52
CHRNA4P43681 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
CHRNA4P43681 HLA-F-220ENST00000434407 884 ntBASIC18.32■□□□□ 0.52
CHRNA4P43681 AC112907.2-201ENST00000448639 330 ntBASIC18.32■□□□□ 0.52
CHRNA4P43681 HOMER2P1-201ENST00000455653 964 ntBASIC18.32■□□□□ 0.52
CHRNA4P43681 AC092647.4-201ENST00000457211 535 ntBASIC18.32■□□□□ 0.52
CHRNA4P43681 AC022616.7-201ENST00000525383 220 ntBASIC18.32■□□□□ 0.52
CHRNA4P43681 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC18.32■□□□□ 0.52
CHRNA4P43681 HYMAI.1-201ENST00000620949 238 ntBASIC18.32■□□□□ 0.52
CHRNA4P43681 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC18.32■□□□□ 0.52
CHRNA4P43681 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNA4P43681 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC18.32■□□□□ 0.52
CHRNA4P43681 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC18.32■□□□□ 0.52
CHRNA4P43681 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNA4P43681 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.32■□□□□ 0.52
CHRNA4P43681 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNA4P43681 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNA4P43681 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CHRNA4P43681 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNA4P43681 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNA4P43681 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNA4P43681 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNA4P43681 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNA4P43681 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNA4P43681 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.31■□□□□ 0.52
CHRNA4P43681 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CHRNA4P43681 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNA4P43681 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNA4P43681 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNA4P43681 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC18.31■□□□□ 0.52
CHRNA4P43681 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNA4P43681 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNA4P43681 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNA4P43681 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CHRNA4P43681 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNA4P43681 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.31■□□□□ 0.52
CHRNA4P43681 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNA4P43681 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNA4P43681 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
CHRNA4P43681 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHRNA4P43681 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CHRNA4P43681 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHRNA4P43681 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
CHRNA4P43681 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CHRNA4P43681 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC18.3■□□□□ 0.52
CHRNA4P43681 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.3■□□□□ 0.52
CHRNA4P43681 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC18.3■□□□□ 0.52
CHRNA4P43681 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHRNA4P43681 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHRNA4P43681 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.3■□□□□ 0.52
CHRNA4P43681 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHRNA4P43681 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHRNA4P43681 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CHRNA4P43681 HBZP1-201ENST00000354915 429 ntBASIC18.3■□□□□ 0.52
CHRNA4P43681 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.3■□□□□ 0.52
CHRNA4P43681 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC18.3■□□□□ 0.52
CHRNA4P43681 VENTXP5-201ENST00000523979 775 ntBASIC18.3■□□□□ 0.52
CHRNA4P43681 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.3■□□□□ 0.52
CHRNA4P43681 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.3■□□□□ 0.52
CHRNA4P43681 AC024563.2-201ENST00000603282 481 ntBASIC18.3■□□□□ 0.52
CHRNA4P43681 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.3■□□□□ 0.52
CHRNA4P43681 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms