Protein–RNA interactions for Protein: P42773

CDKN2C, Cyclin-dependent kinase 4 inhibitor C, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2CP42773 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
CDKN2CP42773 AC007663.1-201ENST00000438948 1240 ntBASIC17.18■□□□□ 0.34
CDKN2CP42773 AC104390.1-201ENST00000555663 520 ntBASIC17.18■□□□□ 0.34
CDKN2CP42773 FITM1-202ENST00000559294 800 ntBASIC17.18■□□□□ 0.34
CDKN2CP42773 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC17.18■□□□□ 0.34
CDKN2CP42773 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.18■□□□□ 0.34
CDKN2CP42773 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.18■□□□□ 0.34
CDKN2CP42773 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.18■□□□□ 0.34
CDKN2CP42773 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
CDKN2CP42773 AC012313.1-201ENST00000593393 3059 ntBASIC17.18■□□□□ 0.34
CDKN2CP42773 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
CDKN2CP42773 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.18■□□□□ 0.34
CDKN2CP42773 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDKN2CP42773 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDKN2CP42773 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDKN2CP42773 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
CDKN2CP42773 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.18■□□□□ 0.34
CDKN2CP42773 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDKN2CP42773 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDKN2CP42773 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CDKN2CP42773 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDKN2CP42773 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
CDKN2CP42773 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDKN2CP42773 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDKN2CP42773 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDKN2CP42773 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDKN2CP42773 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.17■□□□□ 0.34
CDKN2CP42773 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
CDKN2CP42773 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDKN2CP42773 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.17■□□□□ 0.34
CDKN2CP42773 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDKN2CP42773 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDKN2CP42773 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
CDKN2CP42773 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDKN2CP42773 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDKN2CP42773 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDKN2CP42773 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.17■□□□□ 0.34
CDKN2CP42773 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.17■□□□□ 0.34
CDKN2CP42773 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
CDKN2CP42773 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.17■□□□□ 0.34
CDKN2CP42773 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.17■□□□□ 0.34
CDKN2CP42773 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.17■□□□□ 0.34
CDKN2CP42773 AC008550.1-201ENST00000511500 884 ntBASIC17.17■□□□□ 0.34
CDKN2CP42773 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.17■□□□□ 0.34
CDKN2CP42773 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.17■□□□□ 0.34
CDKN2CP42773 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.17■□□□□ 0.34
CDKN2CP42773 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC17.17■□□□□ 0.34
CDKN2CP42773 AC112497.1-201ENST00000624824 639 ntBASIC17.17■□□□□ 0.34
CDKN2CP42773 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDKN2CP42773 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.17■□□□□ 0.34
CDKN2CP42773 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
CDKN2CP42773 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDKN2CP42773 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
CDKN2CP42773 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
CDKN2CP42773 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDKN2CP42773 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.16■□□□□ 0.34
CDKN2CP42773 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.16■□□□□ 0.34
CDKN2CP42773 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDKN2CP42773 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDKN2CP42773 INGX-201ENST00000359239 846 ntBASIC17.16■□□□□ 0.34
CDKN2CP42773 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDKN2CP42773 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDKN2CP42773 MIR1238-201ENST00000408483 83 ntBASIC17.16■□□□□ 0.34
CDKN2CP42773 CCR12P-201ENST00000446203 998 ntBASIC17.16■□□□□ 0.34
CDKN2CP42773 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CDKN2CP42773 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC17.16■□□□□ 0.34
CDKN2CP42773 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
CDKN2CP42773 BX088651.1-201ENST00000540551 451 ntBASIC17.16■□□□□ 0.34
CDKN2CP42773 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDKN2CP42773 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC17.16■□□□□ 0.34
CDKN2CP42773 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
CDKN2CP42773 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
CDKN2CP42773 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC17.16■□□□□ 0.34
CDKN2CP42773 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
CDKN2CP42773 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDKN2CP42773 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.16■□□□□ 0.34
CDKN2CP42773 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDKN2CP42773 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDKN2CP42773 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDKN2CP42773 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDKN2CP42773 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
CDKN2CP42773 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDKN2CP42773 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDKN2CP42773 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDKN2CP42773 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
CDKN2CP42773 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
CDKN2CP42773 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
CDKN2CP42773 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC17.15■□□□□ 0.34
CDKN2CP42773 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDKN2CP42773 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDKN2CP42773 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDKN2CP42773 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.15■□□□□ 0.34
CDKN2CP42773 AC007040.1-201ENST00000416229 477 ntTSL 3 BASIC17.15■□□□□ 0.34
CDKN2CP42773 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC17.15■□□□□ 0.34
CDKN2CP42773 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDKN2CP42773 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
CDKN2CP42773 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CDKN2CP42773 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CDKN2CP42773 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CDKN2CP42773 BCL2-203ENST00000589955 5011 ntBASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms