Protein–RNA interactions for Protein: P35913

PDE6B, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, humanhuman

Predictions only

Length 854 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6BP35913 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PDE6BP35913 AL161938.1-201ENST00000569833 2180 ntBASIC22.29■■□□□ 1.16
PDE6BP35913 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
PDE6BP35913 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PDE6BP35913 AC073621.1-201ENST00000392730 636 ntBASIC22.29■■□□□ 1.16
PDE6BP35913 MCCD1P2-201ENST00000423228 335 ntBASIC22.29■■□□□ 1.16
PDE6BP35913 AL122058.1-202ENST00000426580 252 ntTSL 3 BASIC22.29■■□□□ 1.16
PDE6BP35913 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC22.29■■□□□ 1.16
PDE6BP35913 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC22.29■■□□□ 1.16
PDE6BP35913 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PDE6BP35913 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PDE6BP35913 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC22.29■■□□□ 1.16
PDE6BP35913 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PDE6BP35913 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC22.29■■□□□ 1.16
PDE6BP35913 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC22.29■■□□□ 1.16
PDE6BP35913 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC22.29■■□□□ 1.16
PDE6BP35913 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
PDE6BP35913 AC073592.4-201ENST00000623827 446 ntBASIC22.29■■□□□ 1.16
PDE6BP35913 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
PDE6BP35913 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC22.29■■□□□ 1.16
PDE6BP35913 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
PDE6BP35913 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
PDE6BP35913 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PDE6BP35913 PMPCAP1-201ENST00000508114 1576 ntBASIC22.29■■□□□ 1.16
PDE6BP35913 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC22.29■■□□□ 1.16
PDE6BP35913 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
PDE6BP35913 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
PDE6BP35913 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PDE6BP35913 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
PDE6BP35913 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PDE6BP35913 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC22.28■■□□□ 1.16
PDE6BP35913 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC22.28■■□□□ 1.16
PDE6BP35913 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC22.28■■□□□ 1.16
PDE6BP35913 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC22.28■■□□□ 1.16
PDE6BP35913 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
PDE6BP35913 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PDE6BP35913 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC22.28■■□□□ 1.16
PDE6BP35913 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC22.28■■□□□ 1.16
PDE6BP35913 PRYP5-201ENST00000451909 266 ntBASIC22.28■■□□□ 1.16
PDE6BP35913 AC108751.1-201ENST00000490852 363 ntBASIC22.28■■□□□ 1.16
PDE6BP35913 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC22.28■■□□□ 1.16
PDE6BP35913 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC22.28■■□□□ 1.16
PDE6BP35913 COX5A-206ENST00000568783 571 ntTSL 3 BASIC22.28■■□□□ 1.16
PDE6BP35913 AC005829.1-201ENST00000570002 483 ntBASIC22.28■■□□□ 1.16
PDE6BP35913 SDCCAG3P1-201ENST00000589292 1150 ntBASIC22.28■■□□□ 1.16
PDE6BP35913 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC22.28■■□□□ 1.16
PDE6BP35913 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC22.28■■□□□ 1.16
PDE6BP35913 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
PDE6BP35913 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PDE6BP35913 BRSK2-208ENST00000528841 3586 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
PDE6BP35913 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PDE6BP35913 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
PDE6BP35913 MED29-202ENST00000594368 1471 ntTSL 2 BASIC22.28■■□□□ 1.16
PDE6BP35913 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
PDE6BP35913 FNDC8-201ENST00000158009 1388 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PDE6BP35913 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC22.27■■□□□ 1.16
PDE6BP35913 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC22.27■■□□□ 1.16
PDE6BP35913 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
PDE6BP35913 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PDE6BP35913 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PDE6BP35913 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC22.27■■□□□ 1.16
PDE6BP35913 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PDE6BP35913 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PDE6BP35913 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC22.27■■□□□ 1.16
PDE6BP35913 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC22.27■■□□□ 1.16
PDE6BP35913 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
PDE6BP35913 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC22.27■■□□□ 1.16
PDE6BP35913 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
PDE6BP35913 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
PDE6BP35913 AC093484.2-201ENST00000580996 2166 ntBASIC22.27■■□□□ 1.16
PDE6BP35913 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC22.27■■□□□ 1.16
PDE6BP35913 AL596442.2-201ENST00000610240 980 ntBASIC22.27■■□□□ 1.16
PDE6BP35913 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
PDE6BP35913 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC22.27■■□□□ 1.16
PDE6BP35913 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC22.27■■□□□ 1.16
PDE6BP35913 COA5-201ENST00000328709 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PDE6BP35913 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PDE6BP35913 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PDE6BP35913 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
PDE6BP35913 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
PDE6BP35913 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC22.26■■□□□ 1.15
PDE6BP35913 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
PDE6BP35913 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PDE6BP35913 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PDE6BP35913 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PDE6BP35913 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
PDE6BP35913 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
PDE6BP35913 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC22.26■■□□□ 1.15
PDE6BP35913 AC136632.2-201ENST00000512891 861 ntBASIC22.26■■□□□ 1.15
PDE6BP35913 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PDE6BP35913 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC22.26■■□□□ 1.15
PDE6BP35913 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC22.26■■□□□ 1.15
PDE6BP35913 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC22.26■■□□□ 1.15
PDE6BP35913 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
PDE6BP35913 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC22.26■■□□□ 1.15
PDE6BP35913 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
PDE6BP35913 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
PDE6BP35913 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
PDE6BP35913 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
PDE6BP35913 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC22.26■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms