Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CKS2P33552 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CKS2P33552 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CKS2P33552 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC13.38□□□□□ -0.27
CKS2P33552 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC13.38□□□□□ -0.27
CKS2P33552 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CKS2P33552 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CKS2P33552 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CKS2P33552 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC13.38□□□□□ -0.27
CKS2P33552 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
CKS2P33552 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CKS2P33552 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CKS2P33552 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CKS2P33552 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
CKS2P33552 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CKS2P33552 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CKS2P33552 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
CKS2P33552 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
CKS2P33552 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC13.38□□□□□ -0.27
CKS2P33552 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
CKS2P33552 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC13.38□□□□□ -0.27
CKS2P33552 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
CKS2P33552 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
CKS2P33552 AL118508.1-201ENST00000613502 2345 ntBASIC13.38□□□□□ -0.27
CKS2P33552 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CKS2P33552 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CKS2P33552 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CKS2P33552 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CKS2P33552 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC13.37□□□□□ -0.27
CKS2P33552 AC006116.8-202ENST00000587620 1550 ntBASIC13.37□□□□□ -0.27
CKS2P33552 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC13.37□□□□□ -0.27
CKS2P33552 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC13.37□□□□□ -0.27
CKS2P33552 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC13.37□□□□□ -0.27
CKS2P33552 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CKS2P33552 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC13.37□□□□□ -0.27
CKS2P33552 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
CKS2P33552 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CKS2P33552 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CKS2P33552 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
CKS2P33552 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC13.37□□□□□ -0.27
CKS2P33552 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CKS2P33552 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CKS2P33552 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC13.37□□□□□ -0.27
CKS2P33552 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC13.37□□□□□ -0.27
CKS2P33552 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC13.37□□□□□ -0.27
CKS2P33552 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC13.37□□□□□ -0.27
CKS2P33552 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC13.37□□□□□ -0.27
CKS2P33552 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC13.37□□□□□ -0.27
CKS2P33552 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC13.37□□□□□ -0.27
CKS2P33552 AL121761.2-201ENST00000598007 1648 ntBASIC13.37□□□□□ -0.27
CKS2P33552 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CKS2P33552 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
CKS2P33552 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CKS2P33552 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
CKS2P33552 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CKS2P33552 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CKS2P33552 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC13.37□□□□□ -0.27
CKS2P33552 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CKS2P33552 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
CKS2P33552 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC13.37□□□□□ -0.27
CKS2P33552 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
CKS2P33552 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CKS2P33552 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CKS2P33552 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CKS2P33552 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC13.37□□□□□ -0.27
CKS2P33552 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CKS2P33552 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CKS2P33552 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC13.37□□□□□ -0.27
CKS2P33552 GMCL1P1-201ENST00000463439 1581 ntBASIC13.37□□□□□ -0.27
CKS2P33552 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
CKS2P33552 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
CKS2P33552 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CKS2P33552 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC13.36□□□□□ -0.27
CKS2P33552 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CKS2P33552 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC13.36□□□□□ -0.27
CKS2P33552 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
CKS2P33552 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CKS2P33552 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
CKS2P33552 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
CKS2P33552 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CKS2P33552 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CKS2P33552 TGFBR2-202ENST00000359013 4605 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
CKS2P33552 GATA2-203ENST00000487848 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CKS2P33552 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC13.36□□□□□ -0.27
CKS2P33552 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
CKS2P33552 ACSL3-201ENST00000357430 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CKS2P33552 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC13.36□□□□□ -0.27
CKS2P33552 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC13.36□□□□□ -0.27
CKS2P33552 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CKS2P33552 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CKS2P33552 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CKS2P33552 SNCG-201ENST00000348795 684 ntTSL 2 BASIC13.36□□□□□ -0.27
CKS2P33552 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
CKS2P33552 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC13.36□□□□□ -0.27
CKS2P33552 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC13.36□□□□□ -0.27
CKS2P33552 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC13.36□□□□□ -0.27
CKS2P33552 PLD4-205ENST00000553861 667 ntTSL 2 BASIC13.36□□□□□ -0.27
CKS2P33552 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC13.36□□□□□ -0.27
CKS2P33552 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC13.36□□□□□ -0.27
CKS2P33552 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms