Protein–RNA interactions for Protein: P20339

RAB5A, Ras-related protein Rab-5A, humanhuman

Predictions only

Length 215 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5AP20339 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5AP20339 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC14.14□□□□□ -0.15
RAB5AP20339 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
RAB5AP20339 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC14.14□□□□□ -0.15
RAB5AP20339 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5AP20339 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5AP20339 AC104417.2-201ENST00000562989 1793 ntBASIC14.14□□□□□ -0.15
RAB5AP20339 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5AP20339 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5AP20339 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5AP20339 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC14.14□□□□□ -0.15
RAB5AP20339 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5AP20339 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
RAB5AP20339 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB5AP20339 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.13□□□□□ -0.15
RAB5AP20339 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
RAB5AP20339 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC14.13□□□□□ -0.15
RAB5AP20339 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RAB5AP20339 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB5AP20339 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB5AP20339 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RAB5AP20339 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
RAB5AP20339 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB5AP20339 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB5AP20339 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
RAB5AP20339 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB5AP20339 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RAB5AP20339 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC14.13□□□□□ -0.15
RAB5AP20339 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
RAB5AP20339 MIR4767-201ENST00000582827 78 ntBASIC14.13□□□□□ -0.15
RAB5AP20339 LRP8-202ENST00000347547 2382 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RAB5AP20339 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RAB5AP20339 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB5AP20339 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB5AP20339 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB5AP20339 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC14.13□□□□□ -0.15
RAB5AP20339 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
RAB5AP20339 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
RAB5AP20339 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB5AP20339 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
RAB5AP20339 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
RAB5AP20339 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC14.13□□□□□ -0.15
RAB5AP20339 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC14.13□□□□□ -0.15
RAB5AP20339 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB5AP20339 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
RAB5AP20339 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
RAB5AP20339 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC14.12□□□□□ -0.15
RAB5AP20339 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC14.12□□□□□ -0.15
RAB5AP20339 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB5AP20339 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB5AP20339 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
RAB5AP20339 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB5AP20339 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB5AP20339 EIF4G1-204ENST00000352767 5484 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB5AP20339 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
RAB5AP20339 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB5AP20339 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.12□□□□□ -0.15
RAB5AP20339 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC14.12□□□□□ -0.15
RAB5AP20339 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB5AP20339 ACAD9-201ENST00000308982 2454 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB5AP20339 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB5AP20339 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC14.12□□□□□ -0.15
RAB5AP20339 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC14.12□□□□□ -0.15
RAB5AP20339 NRIP3-203ENST00000531090 980 ntTSL 2 BASIC14.12□□□□□ -0.15
RAB5AP20339 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB5AP20339 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
RAB5AP20339 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB5AP20339 FAF1-202ENST00000396153 6817 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB5AP20339 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB5AP20339 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC14.12□□□□□ -0.15
RAB5AP20339 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB5AP20339 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB5AP20339 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB5AP20339 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB5AP20339 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
RAB5AP20339 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB5AP20339 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB5AP20339 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB5AP20339 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC14.12□□□□□ -0.15
RAB5AP20339 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
RAB5AP20339 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB5AP20339 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB5AP20339 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
RAB5AP20339 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
RAB5AP20339 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB5AP20339 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
RAB5AP20339 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB5AP20339 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB5AP20339 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.11□□□□□ -0.15
RAB5AP20339 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.11□□□□□ -0.15
RAB5AP20339 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB5AP20339 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
RAB5AP20339 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB5AP20339 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB5AP20339 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB5AP20339 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB5AP20339 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
RAB5AP20339 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC14.11□□□□□ -0.15
RAB5AP20339 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC14.11□□□□□ -0.15
RAB5AP20339 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 45.3 ms