Protein–RNA interactions for Protein: P15884

TCF4, Transcription factor 4, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4P15884 PVRIG2P-201ENST00000435460 978 ntBASIC18.94■□□□□ 0.62
TCF4P15884 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.94■□□□□ 0.62
TCF4P15884 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.94■□□□□ 0.62
TCF4P15884 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TCF4P15884 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.94■□□□□ 0.62
TCF4P15884 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
TCF4P15884 AC005363.2-201ENST00000618631 242 ntBASIC18.94■□□□□ 0.62
TCF4P15884 KDM5C-203ENST00000375383 5122 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
TCF4P15884 LGALS8-AS1-201ENST00000487567 1457 ntBASIC18.94■□□□□ 0.62
TCF4P15884 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
TCF4P15884 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC18.94■□□□□ 0.62
TCF4P15884 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
TCF4P15884 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TCF4P15884 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
TCF4P15884 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
TCF4P15884 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
TCF4P15884 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.93■□□□□ 0.62
TCF4P15884 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCF4P15884 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCF4P15884 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC18.93■□□□□ 0.62
TCF4P15884 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.93■□□□□ 0.62
TCF4P15884 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCF4P15884 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCF4P15884 LINC00167-201ENST00000530583 1419 ntBASIC18.93■□□□□ 0.62
TCF4P15884 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
TCF4P15884 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCF4P15884 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC18.93■□□□□ 0.62
TCF4P15884 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.93■□□□□ 0.62
TCF4P15884 TUBGCP3-202ENST00000375669 2723 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TCF4P15884 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCF4P15884 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
TCF4P15884 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCF4P15884 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCF4P15884 AC117947.1-201ENST00000427448 529 ntBASIC18.93■□□□□ 0.62
TCF4P15884 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCF4P15884 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCF4P15884 COX11P1-201ENST00000489116 835 ntBASIC18.93■□□□□ 0.62
TCF4P15884 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC18.93■□□□□ 0.62
TCF4P15884 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
TCF4P15884 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC18.93■□□□□ 0.62
TCF4P15884 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCF4P15884 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCF4P15884 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC18.93■□□□□ 0.62
TCF4P15884 LINC00896-202ENST00000609602 2128 ntBASIC18.93■□□□□ 0.62
TCF4P15884 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC18.93■□□□□ 0.62
TCF4P15884 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
TCF4P15884 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCF4P15884 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCF4P15884 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCF4P15884 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
TCF4P15884 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCF4P15884 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC18.92■□□□□ 0.62
TCF4P15884 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
TCF4P15884 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.92■□□□□ 0.62
TCF4P15884 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCF4P15884 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCF4P15884 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCF4P15884 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.92■□□□□ 0.62
TCF4P15884 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TCF4P15884 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCF4P15884 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCF4P15884 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCF4P15884 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCF4P15884 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.92■□□□□ 0.62
TCF4P15884 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCF4P15884 LIN28AP1-201ENST00000429574 405 ntBASIC18.92■□□□□ 0.62
TCF4P15884 AL137013.1-201ENST00000432946 1228 ntBASIC18.92■□□□□ 0.62
TCF4P15884 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCF4P15884 ATP5G1P1-201ENST00000448724 379 ntBASIC18.92■□□□□ 0.62
TCF4P15884 RASA4DP-201ENST00000460726 1199 ntBASIC18.92■□□□□ 0.62
TCF4P15884 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC18.92■□□□□ 0.62
TCF4P15884 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
TCF4P15884 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCF4P15884 YBX1P2-201ENST00000489612 999 ntBASIC18.92■□□□□ 0.62
TCF4P15884 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCF4P15884 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.92■□□□□ 0.62
TCF4P15884 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.92■□□□□ 0.62
TCF4P15884 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC18.92■□□□□ 0.62
TCF4P15884 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCF4P15884 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
TCF4P15884 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC18.92■□□□□ 0.62
TCF4P15884 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
TCF4P15884 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TCF4P15884 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.92■□□□□ 0.62
TCF4P15884 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.92■□□□□ 0.62
TCF4P15884 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCF4P15884 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TCF4P15884 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
TCF4P15884 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC18.92■□□□□ 0.62
TCF4P15884 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC18.92■□□□□ 0.62
TCF4P15884 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCF4P15884 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
TCF4P15884 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.92■□□□□ 0.62
TCF4P15884 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.91■□□□□ 0.62
TCF4P15884 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.91■□□□□ 0.62
TCF4P15884 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
TCF4P15884 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
TCF4P15884 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
TCF4P15884 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
TCF4P15884 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms