Protein–RNA interactions for Protein: P12644

BMP4, Bone morphogenetic protein 4, humanhuman

Predictions only

Length 408 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BMP4P12644 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
BMP4P12644 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
BMP4P12644 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
BMP4P12644 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
BMP4P12644 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC16.68■□□□□ 0.26
BMP4P12644 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
BMP4P12644 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC16.68■□□□□ 0.26
BMP4P12644 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC16.68■□□□□ 0.26
BMP4P12644 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
BMP4P12644 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
BMP4P12644 MIR1238-201ENST00000408483 83 ntBASIC16.68■□□□□ 0.26
BMP4P12644 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC16.68■□□□□ 0.26
BMP4P12644 TSPY15P-201ENST00000457163 923 ntBASIC16.68■□□□□ 0.26
BMP4P12644 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
BMP4P12644 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
BMP4P12644 KRT18P21-201ENST00000515767 1272 ntBASIC16.68■□□□□ 0.26
BMP4P12644 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.68■□□□□ 0.26
BMP4P12644 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC16.68■□□□□ 0.26
BMP4P12644 BANP-227ENST00000626016 2144 ntTSL 2 BASIC16.68■□□□□ 0.26
BMP4P12644 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
BMP4P12644 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.68■□□□□ 0.26
BMP4P12644 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.68■□□□□ 0.26
BMP4P12644 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
BMP4P12644 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
BMP4P12644 AL162727.3-201ENST00000635661 2787 ntBASIC16.68■□□□□ 0.26
BMP4P12644 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.68■□□□□ 0.26
BMP4P12644 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
BMP4P12644 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
BMP4P12644 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC16.68■□□□□ 0.26
BMP4P12644 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
BMP4P12644 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
BMP4P12644 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
BMP4P12644 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
BMP4P12644 KRT18P22-201ENST00000402024 1347 ntBASIC16.68■□□□□ 0.26
BMP4P12644 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
BMP4P12644 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BMP4P12644 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BMP4P12644 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BMP4P12644 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
BMP4P12644 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
BMP4P12644 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
BMP4P12644 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BMP4P12644 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
BMP4P12644 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.67■□□□□ 0.26
BMP4P12644 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
BMP4P12644 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
BMP4P12644 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
BMP4P12644 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BMP4P12644 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC16.67■□□□□ 0.26
BMP4P12644 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
BMP4P12644 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BMP4P12644 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
BMP4P12644 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
BMP4P12644 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BMP4P12644 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
BMP4P12644 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BMP4P12644 MIR1224-201ENST00000408193 85 ntBASIC16.67■□□□□ 0.26
BMP4P12644 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.67■□□□□ 0.26
BMP4P12644 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.67■□□□□ 0.26
BMP4P12644 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
BMP4P12644 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC16.67■□□□□ 0.26
BMP4P12644 AC005363.2-201ENST00000618631 242 ntBASIC16.67■□□□□ 0.26
BMP4P12644 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
BMP4P12644 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BMP4P12644 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BMP4P12644 AC138028.4-201ENST00000564984 1845 ntBASIC16.67■□□□□ 0.26
BMP4P12644 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC16.67■□□□□ 0.26
BMP4P12644 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BMP4P12644 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.67■□□□□ 0.26
BMP4P12644 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BMP4P12644 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC16.67■□□□□ 0.26
BMP4P12644 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
BMP4P12644 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC16.67■□□□□ 0.26
BMP4P12644 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BMP4P12644 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
BMP4P12644 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BMP4P12644 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BMP4P12644 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
BMP4P12644 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BMP4P12644 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
BMP4P12644 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.66■□□□□ 0.26
BMP4P12644 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
BMP4P12644 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
BMP4P12644 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.66■□□□□ 0.26
BMP4P12644 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.66■□□□□ 0.26
BMP4P12644 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
BMP4P12644 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
BMP4P12644 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC16.66■□□□□ 0.26
BMP4P12644 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
BMP4P12644 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC16.66■□□□□ 0.26
BMP4P12644 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BMP4P12644 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
BMP4P12644 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
BMP4P12644 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.66■□□□□ 0.26
BMP4P12644 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
BMP4P12644 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.66■□□□□ 0.26
BMP4P12644 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC16.66■□□□□ 0.26
BMP4P12644 FITM1-202ENST00000559294 800 ntBASIC16.66■□□□□ 0.26
BMP4P12644 C2orf69P3-201ENST00000565542 1120 ntBASIC16.66■□□□□ 0.26
BMP4P12644 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 90.6 ms